BLASTX nr result

ID: Coptis23_contig00020096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020096
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76041.1| hypothetical protein VITISV_002168 [Vitis vinifera]   108   4e-22
ref|XP_003634204.1| PREDICTED: probable FKBP-type peptidyl-proly...   107   1e-21
ref|XP_002532494.1| FK506 binding protein, putative [Ricinus com...   106   2e-21
ref|XP_002318521.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_004137497.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   105   3e-21

>emb|CAN76041.1| hypothetical protein VITISV_002168 [Vitis vinifera]
          Length = 257

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/60 (86%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   CEGIEYVLRSMKAGGKRRVVIPPNLGFGEKGSDLGSGEQIPPFATLDYIIEVDKVSIAPA 182
           CEGIE VLRSMKAGGKRRV+IPP+LGFGEKG+DLGSG QIPP ATL+YI+EVDKVSIAPA
Sbjct: 198 CEGIESVLRSMKAGGKRRVIIPPSLGFGEKGADLGSGLQIPPSATLEYIVEVDKVSIAPA 257


>ref|XP_003634204.1| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           5, chloroplastic-like [Vitis vinifera]
           gi|297734309|emb|CBI15556.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = +3

Query: 3   CEGIEYVLRSMKAGGKRRVVIPPNLGFGEKGSDLGSGEQIPPFATLDYIIEVDKVSIAPA 182
           CEGIE VLRSMKAGGKRRV IPP+LGFGEKG+DLGSG QIPP ATL+YI+EVDKVSIAPA
Sbjct: 199 CEGIESVLRSMKAGGKRRVTIPPSLGFGEKGADLGSGLQIPPSATLEYIVEVDKVSIAPA 258


>ref|XP_002532494.1| FK506 binding protein, putative [Ricinus communis]
           gi|223527793|gb|EEF29893.1| FK506 binding protein,
           putative [Ricinus communis]
          Length = 266

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/60 (81%), Positives = 56/60 (93%)
 Frame = +3

Query: 3   CEGIEYVLRSMKAGGKRRVVIPPNLGFGEKGSDLGSGEQIPPFATLDYIIEVDKVSIAPA 182
           CEGIEYVLRSMKAGGKR+V +P +LGFGE G+DLGSG QIPPFATL+YI+EV+KVSIAPA
Sbjct: 207 CEGIEYVLRSMKAGGKRKVTVPSSLGFGENGADLGSGVQIPPFATLEYIVEVEKVSIAPA 266


>ref|XP_002318521.1| predicted protein [Populus trichocarpa] gi|222859194|gb|EEE96741.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  106 bits (264), Expect = 2e-21
 Identities = 47/60 (78%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   CEGIEYVLRSMKAGGKRRVVIPPNLGFGEKGSDLGSGEQIPPFATLDYIIEVDKVSIAPA 182
           CEG+EYVLRS+KAGGKRRV++PPNLGF E G+DLG+G QIPPFATL+YI+EV++VSIAPA
Sbjct: 199 CEGVEYVLRSVKAGGKRRVIVPPNLGFRENGADLGTGVQIPPFATLEYIVEVERVSIAPA 258


>ref|XP_004137497.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2,
           chloroplastic-like [Cucumis sativus]
          Length = 252

 Score =  105 bits (263), Expect = 3e-21
 Identities = 47/60 (78%), Positives = 57/60 (95%)
 Frame = +3

Query: 3   CEGIEYVLRSMKAGGKRRVVIPPNLGFGEKGSDLGSGEQIPPFATLDYIIEVDKVSIAPA 182
           CEG+EYVLRSMK+GGK+RV+IP +LGFGE G+DLG+G QIPPFATL+Y+IE+DKVSIAPA
Sbjct: 193 CEGLEYVLRSMKSGGKKRVIIPSSLGFGENGADLGTGVQIPPFATLEYVIEIDKVSIAPA 252


Top