BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020093
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    96   7e-18
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    92   1e-16
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    91   1e-16
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    89   6e-16
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                86   5e-15

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 22/218 (10%)
 Frame = +2

Query: 23   SMLWNWSERPEELLTEIAKRINSIEDFVRFGVVC-HWRSVTLNNKRHYPLILNTPPWLML 199
            +++ +WS+ P++ L  IA++++S+ED+VRFG VC  W S+  + +   P   +  PWLML
Sbjct: 917  TVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCP--SSKSPWLML 974

Query: 200  PEEKIGKDRSFCNLFENKYYRLNLPDDASACTW-WGSPYGWLAYIDLEQRLHLINPLSGT 376
             E++  + R F +    K Y + LP+      W WGSPYGWL  I  +  + L+NPL+  
Sbjct: 975  AEKENSEIRGFYSPLSGKVYEIRLPEVVG--KWCWGSPYGWLVTIGTDLDMCLLNPLTRV 1032

Query: 377  RRPLP------------DELTETE-----FLHKVVV-SCPSSSSANYDDQHKEFLVFALS 502
            +  LP            D  T+       F++K V+ S PSS            ++    
Sbjct: 1033 QILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSPDC-------AVMIIYSD 1085

Query: 503  ISQLAFTRPGDAGWTYI--GHCYCNDVIHYKGQYYSVD 610
              +LAFT+PG   WT +       +D+I++ G + +V+
Sbjct: 1086 YGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVN 1123


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 71/232 (30%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
 Frame = +2

Query: 35  NWSERPEELLTEIAKRINSIEDFVRFGVVCH-WRSVTLNNKRHYPLILNTPPWLMLPEEK 211
           +WS+   ELL  IAK+     D+VRF  VCH WR+       H P  L   PWLMLP+ +
Sbjct: 3   DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQL---PWLMLPQSQ 59

Query: 212 IGKD-RSFCNLFENKYYRLNLPDDASACTWWGSPYGWLAYIDLEQRLHLINPLSGTRRPL 388
                R F +L  NK++ L LP+ +      GS +GWL  +D    + L+NPL+ ++  L
Sbjct: 60  PHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHL 119

Query: 389 PDELT---------------------------------ETEFLHKVVVSCPSSSSANYDD 469
           P   T                                    F+ K ++   SSS AN  D
Sbjct: 120 PPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTIL---SSSPANGSD 176

Query: 470 QHKEFLVFALSISQLAFTRPGDAGWTYI--GHCYCNDVIHYKGQYYSVDSYG 619
                +V       LA  R  D  WT++     Y  DVI ++G +Y+V+ YG
Sbjct: 177 FIA--VVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYG 226


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 71/232 (30%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
 Frame = +2

Query: 35  NWSERPEELLTEIAKRINSIEDFVRFGVVCH-WRSVTLNNKRHYPLILNTPPWLMLPEEK 211
           +WS+   ELL  IAK+     D+VRF  VCH WR+       H P  L   PWLMLP+ +
Sbjct: 3   DWSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQL---PWLMLPQSQ 59

Query: 212 IGKD-RSFCNLFENKYYRLNLPDDASACTWWGSPYGWLAYIDLEQRLHLINPLSGTRRPL 388
                R F +L  NK++ L LP+ +      GS +GWL  +D    + L+NPL+ ++  L
Sbjct: 60  PHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHL 119

Query: 389 PDELT---------------------------------ETEFLHKVVVSCPSSSSANYDD 469
           P   T                                    F+ K ++   SSS AN  D
Sbjct: 120 PPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTIL---SSSPANGSD 176

Query: 470 QHKEFLVFALSISQLAFTRPGDAGWTYI--GHCYCNDVIHYKGQYYSVDSYG 619
                +V       LA  R  D  WT++     Y  DVI ++G +Y+V+ YG
Sbjct: 177 FIA--VVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYG 226


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 69/239 (28%), Positives = 104/239 (43%), Gaps = 41/239 (17%)
 Frame = +2

Query: 26  MLWNWSERPEELLTEIAKRINSIEDFVRFGVVCH-WRSVTLNNKRHYPLILNTPPWLMLP 202
           M+ +WS+ P EL+  I+K +    D++    VCH WR        H P  L   PWLMLP
Sbjct: 1   MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQL---PWLMLP 57

Query: 203 EEKIGKD---RSFCNLFENKYYRLNLPDDASACTWWGSPYGWLAYIDLEQRLHLINPLSG 373
           + +   +   R+F +L  NK++ LNLP+ +      GS +GWL  +D    + LINPL+ 
Sbjct: 58  QSQSQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTR 117

Query: 374 TRRPLP---------------------------DELT------ETEFLHKVVVSCPSSSS 454
            +  LP                           + +T         F+ KVV+S      
Sbjct: 118 AKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKD 177

Query: 455 ANYDDQHKEFLVFAL--SISQLAFTRPGDAGWTYI--GHCYCNDVIHYKGQYYSVDSYG 619
            N       F+V A+      LA+ R GD  W+ +     +C DVI   G +Y+V+  G
Sbjct: 178 NN-------FVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAG 229


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
 Frame = +2

Query: 35  NWSERPEELLTEIAKRINSIEDFVRFGVVC-HWRSVTLNNKRHYPLILNTPPWLMLPEEK 211
           +WSE   +LL  I + +N IED++ FG VC  W SV    K ++   L   PWLML EE+
Sbjct: 3   DWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVA--TKANFNNDLCRAPWLMLAEEE 60

Query: 212 IGKDRSFCNLFENKYYRLNLPD-DASACTWWGSPYGWLAYIDLEQRLHLINPLSGTRRPL 388
             + R F +L+        +P      C       GWL  +  E  + L++P S  +  L
Sbjct: 61  DNEVRKFFSLYNGMILNKRIPKASRKRCL---ESMGWLITVGEEGEISLLHPFSDVQIEL 117

Query: 389 PDELTETE-----------FLHKVVVSCPSSSSANYDDQHKEFLVFALSISQLAFTRPGD 535
           P + T  E           F+ K V+S   S +++Y       +V       L+F RPGD
Sbjct: 118 PHQNTTVEYNKHQTGALTCFIGKAVLSASPSHTSDY-----LLMVIDGGSRFLSFWRPGD 172

Query: 536 AGWTY-----IGHCYCNDVIHYKGQYYSVDSYG 619
             WT      I +    D+I++ GQ Y+VD  G
Sbjct: 173 IRWTRVTWEGINYSSFADLIYFNGQIYAVDYSG 205