BLASTX nr result
ID: Coptis23_contig00020087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00020087
(2186 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm... 236 2e-59
dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica... 216 3e-53
dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica... 211 8e-52
dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou... 145 3e-32
ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-29
>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
gi|223527710|gb|EEF29816.1| conserved hypothetical
protein [Ricinus communis]
Length = 690
Score = 236 bits (602), Expect = 2e-59
Identities = 190/699 (27%), Positives = 322/699 (46%), Gaps = 24/699 (3%)
Frame = +3
Query: 123 MDMDAGKKRPVRLTPPTYA---PSLVFLHGKRERDQVFCTLSD-RCCHDRSVREMRGMKC 290
M+ + KRP PP A P LV+ HGK DQ F T+SD + R + E+ C
Sbjct: 1 MEDNGAAKRPEHERPPAPAGPYPWLVYCHGKGREDQTFWTISDPKRTALRRIPELDSKIC 60
Query: 291 VASCYGWLILKSFYSNQCYLFDPVSVTNIHLPPL-IHKSFEVGVLTCHPSNPNCAVLFVS 467
AS +GW +L++P+++ I LP L ++ G ++ P C +L
Sbjct: 61 WASSHGWCFFSDRARRHFFLWNPLTLEKIDLPDLQVYNIISSGYISSSPRETGCKILLFV 120
Query: 468 NAKKSFIYCRIGDNKWIERKLVWRENSRKVVPYGDV--SVTSCEEKIYMF-FINGMVVID 638
S ++ +GD +W E + + KVV Y + C K+Y+F ++ +
Sbjct: 121 GDHPSIMFLELGDKEWTEIDYSFLQTG-KVVEYDHILRDPVYCNGKLYVFSYLTNSAIFV 179
Query: 639 VRDTPASVCILKVERCEF-SIPDYLAHTNY---YVESCGEIFRVCLLHLGSTNLIQSVEV 806
+ + +L+ E+ +I L N+ +VE+ GEI+ + +L G + + +EV
Sbjct: 180 LDEINKGGVVLRSLNVEYQNIMSQLESLNFRRCFVEASGEIYGINILLGGYDSRVVDIEV 239
Query: 807 FKLDFSRMCWAKVENVGNQIFLLGPSCGTLVSATDLGVKGSCIYFTREEYKSLYRFDMDD 986
K+DFSRM W KVE V + + L ++G+ +YF +++K LY + ++D
Sbjct: 240 RKIDFSRMAWEKVECVKDSVLFLDDHYSISCPEIRPEIQGNRLYFVLKDHK-LYSYSIED 298
Query: 987 GSITVT---LPCSKKFSHWVQPFWMVPHCKVQEKKDLAKVEKARDGGHMTSNWNXXXXXX 1157
SI++ LP S WV P + + + ++++ + ++
Sbjct: 299 RSISLVSPYLPEDPFLSFWVMPD-LRDYAGSRNREEIDACGEKQEIHQEAYFHRLPSDVI 357
Query: 1158 XXXXXXXXXXGDCIRFRLTCKTWISINQPIRSYPQLILSNSGSQQIPWLLSFSKKTKGAC 1337
+ R TC + S+ PI+ +L L N S P L+ F K C
Sbjct: 358 TSLIIKRLNLVHYLNLRTTCSLFRSLAPPIQQ--KLCLQNHSSS--PRLMFFEKDN--IC 411
Query: 1338 KFYHPIFSYAYTMNIPD-LEGMIVRHANFGWLLLSKGNRSIFFFNPTTMETIKLPDYKSA 1514
F+ P S +++P L G + ++ GW ++S+G + FNP T E +K D S
Sbjct: 412 TFFEPKNSDKCYLHLPQQLAGCQICYSKDGWFMMSRGKNFFYCFNPLTGEILKFTDTTSV 471
Query: 1515 DVNCYMFEFVNISFSSPPTSSDCMVFGHFESHIYSVQMSVYMKQQDTWFDFIYKSKV--- 1685
E + + FS+ PTSSDC+ +V +S + +F F +K
Sbjct: 472 ----LELELICVGFSTSPTSSDCI----------AVTISKLNNLIEIYFAFRGDTKWVLE 517
Query: 1686 ----PCDFMASHCNPVFYEGVFYCLGKNGKVGIFDPREEDYKEVWKVLPVQAVLSFKNIE 1853
DF +PVFY GVFY LG+ G + I + ++ W+VL K+
Sbjct: 518 QIDDDTDFTFGGNSPVFYNGVFYYLGEKGNLAILEIIDD--MVTWEVL-----WDLKSPR 570
Query: 1854 NHMTSVKSFLVEYGGEILSFFV-PVNKPITAFKLDLSEKKWVRVESLGDKVAFLSHTTSM 2030
+H ++FLVE G +LS FV + F+L S+ W+RVE+LG+ + +S ++S
Sbjct: 571 SHCH--QNFLVECDGNLLSVFVGEFEGSVEVFRLSQSKMVWIRVENLGNYMVCVSRSSSF 628
Query: 2031 LVPAGVKGIENRIYLPKFHGQDIMYYSLSTGSYSYFGKK 2147
A G+EN+I+ P+F+G++I++YSL T + F ++
Sbjct: 629 SSLAKAPGMENKIFFPRFYGENIVFYSLDTNKFHSFDRQ 667
>dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica Group]
gi|42408294|dbj|BAD09449.1| F-box protein family-like
[Oryza sativa Japonica Group] gi|125561733|gb|EAZ07181.1|
hypothetical protein OsI_29426 [Oryza sativa Indica
Group] gi|125603601|gb|EAZ42926.1| hypothetical protein
OsJ_27515 [Oryza sativa Japonica Group]
Length = 712
Score = 216 bits (549), Expect = 3e-53
Identities = 187/720 (25%), Positives = 313/720 (43%), Gaps = 57/720 (7%)
Frame = +3
Query: 165 PPTYAPSLVFLHGKRERDQVFCTLSDRCCHDRSVREMRGMKCVASCYG-WLILKSFYSNQ 341
PP + + G R F +SD H+ V E+RG C+ +G WL++ +
Sbjct: 11 PPGFGTRPWLVQGSRGDTLTFVDVSDLSLHETVVPEVRGKTCLGCMHGDWLLMLDESTAD 70
Query: 342 CYLF-------DPVSVTNIHLPPLIHKSFEVGVLTCHPSNPNCAVLFVSNAKKS----FI 488
C+L + + +H PPL ++E + P + NC +L S+ + +
Sbjct: 71 CFLLRITTNPRTKIQLPPLHQPPLFLSTYE---MLESPESANCTILVASSTEAEEECYLL 127
Query: 489 YCRIGDNKWIERKLVWRENSRKVVPYGDVSVTSCEE----KIYMFFINGMVVIDVRDTPA 656
+C GD W ++ V PY D+S +S KIY F N ++ IDV D
Sbjct: 128 HCHPGDEMW----------TKSVSPYDDISFSSLMRNYGGKIYDFASN-LIAIDVIDGKI 176
Query: 657 SVCILKVERCEFSIPDYLAHTNYYV-ESCGEIFRVCLLHLG---STNLIQSVEVFKLDFS 824
+ L + E D Y++ ESCG++F + + LG L+ ++ VF L+
Sbjct: 177 ELQQLGTIKDEEE--DSRRCGRYHIIESCGKLFLLWIDDLGCFYDDGLLTAIRVFCLNLE 234
Query: 825 RMCWAKVENVGN-QIFLLGPSCGTLVSATDLGVKGSCIYFTREEYKS--LYRFDMDDGSI 995
+ W +VE +GN + FL+ + + + ++G+C+Y S LY+F +DD +I
Sbjct: 235 TLSWERVEGIGNDRAFLISGTYAFSCPSIEGVLQGNCVYLVWSSCDSERLYKFCLDDMTI 294
Query: 996 TVTLPCSKKFSHWVQPFWMVPHC-------------------KVQEKKDLAKVEKARDGG 1118
+ + W + FW +P K + ++ ++ G
Sbjct: 295 SFHQILPQPTKSWSRAFWAIPASTQSISMPQESTIPNNLLWRKPSKDNPPNDFDEHKEDG 354
Query: 1119 HMTS--NWNXXXXXXXXXXXXXXXXGDCIRFRLTCKTWISINQPIRSYPQLILSNSGSQQ 1292
S W+ D IRF CK W + PI ++
Sbjct: 355 QENSLRPWDHLPVELLELIVSNLSLVDRIRFPTVCKAWSEVLNPIEQ----------AKV 404
Query: 1293 IPWLLSFSKKTKGACKFYHPIFSYAYTMNIP----DLEGMIVRHANFGWLLLSKG--NRS 1454
PWL+ SK+ G CK + P+ S Y + + + + I R + GW+L S G
Sbjct: 405 WPWLMHISKQD-GTCKLFDPLRSENYNIQVTIFDTNEDRHIFRSSKDGWVLASAGIYGND 463
Query: 1455 IFFFNPTTMETIKLPDYKSADVNCYMFEFVNISFSSP-PTSSDCMVFGHFESHIYSVQMS 1631
IF NP T E ++ P + +++ + +SFSS P DC FG S +S
Sbjct: 464 IFIINPFTEEIVEPP------MLAFLYNYNGVSFSSSNPMCLDCAFFG-INSSDSGKFLS 516
Query: 1632 VYMKQ--QDTWFDFIYKSKVPCDFMASHCNPVFYEGVFYCLGKNGKVGIFDPREEDYKEV 1805
+ Q + W + ++ V F + NPV ++G FYCLG+ G +G+FDP ++ +
Sbjct: 517 TFTWQHGEPHWIEQEFEYNV--SFPVGYNNPVMFDGKFYCLGRKGNLGVFDPTSNTWRIL 574
Query: 1806 WKVLPVQAVLSFKNIENHMTSVKSFLVEYGGEILSFFV-PVNKPITAFKLDLSEKKWVRV 1982
K P+ + E+H+ +LV+ GE++S F+ N+ FKL+ +E WV V
Sbjct: 575 DKPEPIHVEMDLFE-EDHIGREFCYLVDMDGELISVFLRNANELPRVFKLNRTEISWVEV 633
Query: 1983 ESLGDKVAFLSHTTSMLVPAGVKGIENRIYLPKF--HGQDIMY-YSLSTGSYSYFGKKDP 2153
E +G FL + +S V + G NRIY P++ G+ + Y + T S S++G +P
Sbjct: 634 EDIGGGALFLDYRSSYGVASPDGGNGNRIYFPRYSKDGKPVFYDMNKKTYSPSFYGVIEP 693
>dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica Group]
gi|125603604|gb|EAZ42929.1| hypothetical protein
OsJ_27518 [Oryza sativa Japonica Group]
Length = 710
Score = 211 bits (536), Expect = 8e-52
Identities = 186/716 (25%), Positives = 316/716 (44%), Gaps = 53/716 (7%)
Frame = +3
Query: 165 PPTYAPSLVFLHGKRERDQVFCTLSDRCCHDRSVREMRGMKCVASCYG-WLILKSFYSNQ 341
PP + + G R F +SD H+ V E+RG C+ +G WL++ +
Sbjct: 11 PPGFGTRPWLVQGSRGDTLTFVDVSDLSLHETVVPEVRGKTCLGGMHGDWLLMLHESTAD 70
Query: 342 CYLFDPVSV---TNIHLPPLIHKSFEVGVLTC--HPSNPNCAVLFVSNAKKS----FIYC 494
C+L +S T I LPPL + + P +P C +L S+ + +YC
Sbjct: 71 CFLLR-ISTNPRTKIQLPPLHQPLNFLSTIKMLESPDSPKCTILIASSPEVEEESYLLYC 129
Query: 495 RIGDNKWIERKLVWRENSRKVVPYGDVSVTSC----EEKIYMFFINGMVVIDVRDTPASV 662
R G+++W ++ V P+ D+ +++ E KI N +VVID+ D +
Sbjct: 130 RPGEDEW----------TKLVSPFNDIHLSAFMCNYEGKICSACSN-LVVIDMVDGKIQL 178
Query: 663 CILKVERCEFSIPDYLAHTNYY--VESCGEIFRVCLLHLG---STNLIQSVEVFKLDFSR 827
+ + E Y + Y VESCG++F + + LG + L+ +++VF LD
Sbjct: 179 QRVGTIKDE---EKYARGSGCYHVVESCGKLFLLWIEELGCFGNDGLLTAIDVFCLDLEL 235
Query: 828 MCWAKVENVGN-QIFLLGPSCGTLVSATDLGVKGSCIYFTREEYKS--LYRFDMDDGSIT 998
M W +VE++G+ + FL+ + + + ++G+C+Y S LY+F +DD +I+
Sbjct: 236 MSWERVESIGSDRTFLISENYTFSCPSIEGVLQGNCVYLVWSSCDSERLYKFCLDDMTIS 295
Query: 999 VTLPCSKKFSHWVQPFWMVPHC-------KVQEKKDL---AKVEK--------ARDG-GH 1121
S+ W + FW VP ++ +K + K+ K DG G+
Sbjct: 296 FQQILSQPTKPWCRAFWTVPASIESILPMEISDKPNSLLSTKLSKDILLNDLDEHDGLGN 355
Query: 1122 MTSNWNXXXXXXXXXXXXXXXXGDCIRFRLTCKTWISINQPIRSYPQLILSNSGSQQIPW 1301
W D IRF C W ++ PI ++ PW
Sbjct: 356 SLCLWEHLPVDLLELIVSNLSLVDRIRFPTVCMAWSKVSNPIEQ----------AKVWPW 405
Query: 1302 LLSFSKKTKGACKFYHPIFSYAYTMNIP----DLEGMIVRHANFGWLLLSKG--NRSIFF 1463
L+ SK+ G C+ + P+ Y M + + + I R + GW+ S G IF
Sbjct: 406 LMHISKQD-GMCRLFDPLRGEVYNMQVSIFDTNEDRHIFRSSKDGWVFTSAGIYGHDIFI 464
Query: 1464 FNPTTMETIKLPDYKSADVNCYMFEFVNISFSSP-PTSSDCMVFGHFESHIYS-VQMSVY 1637
NP T + ++ P ++ + + +SFSSP P +C FG S + + +
Sbjct: 465 INPFTEDIVEPPMFERR------YHYNGVSFSSPNPMCPNCYFFGINSSLSGKFLNIHTW 518
Query: 1638 MKQQDTWFDFIYKSKVPCDFMASHCNPVFYEGVFYCLGKNGKVGIFDPREEDYKEVWKVL 1817
++ W + ++ VP F + NPV + G FYCLG+ G +G FDP ++ + K
Sbjct: 519 RHEETEWIEQRFEYDVP--FPVGYNNPVMFCGKFYCLGRKGNLGAFDPTSNTWEILDKPE 576
Query: 1818 PVQAVLSFKNIENHMTSVKSFLVEYGGEILSFFVP-VNKPITAFKLDLSEKKWVRVESLG 1994
P+ + +H +LV+ GE++S + ++ FKLDL++ WV VE +G
Sbjct: 577 PIHVEMDLLQ-NDHRGREFCYLVDLEGELISVLLHNASEAPRVFKLDLTKMSWVEVEDIG 635
Query: 1995 DKVAFLSHTTSMLVPAGVKGIENRIYLPKFH-GQDIMYYSLSTGSY--SYFGKKDP 2153
FL H TS V + G NRIY P++ + ++Y + Y S++G +P
Sbjct: 636 GGALFLDHRTSHGVGSPDGGHGNRIYFPRYSVDRKPVFYDMDNKMYYPSFYGHIEP 691
>dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125603599|gb|EAZ42924.1| hypothetical protein
OsJ_27514 [Oryza sativa Japonica Group]
Length = 760
Score = 145 bits (367), Expect = 3e-32
Identities = 129/497 (25%), Positives = 217/497 (43%), Gaps = 40/497 (8%)
Frame = +3
Query: 225 FCTLSDRCCHDRSVREMRGMKCVASCYG--WLILKSFYSNQCYLFDPVSVTNIHLPPLIH 398
F + DR H R V +++G C+ +G WL++ + C+LF + + I LPPL
Sbjct: 35 FVDILDRSLHVRVVPDLQGKLCLGCVHGGDWLLMVDEITGGCFLFCLSNSSTISLPPLRE 94
Query: 399 KSFEVG---VLTCHPSNPNCAVLFVS--NAKKSFI-YCRIGDNKWIERKLVWRENSRKVV 560
++G VL P N +C V+ S ++SF+ +C GD +W ++ +V
Sbjct: 95 PLGDMGACVVLGSSPLNRDCTVVITSLPEPEESFLLHCHPGDEEW----------TKLMV 144
Query: 561 PYGDV----SVTSCEEKIY-MFFINGMVVIDVRDTPASVCILKVE---RCEFSIPDYLAH 716
P G + +C ++Y + ++ IDV D IL +E C + Y+
Sbjct: 145 PLGSDRLFGKLVNCAGQLYSLSSFRKLLTIDVIDDALHAKILNIEWESSCGHNFEPYI-- 202
Query: 717 TNYYVESCGEIFRVCLLHLGSTNL--IQSVEVFKLDFSRMCWAKVENVG-NQIFLLGPSC 887
VESCG++F V G + V V++LD + KV+++G ++ FL+
Sbjct: 203 ----VESCGKLFVVLASLYGYPYNCPLNGVSVYRLDRAESMLKKVDDIGTDRAFLISGHY 258
Query: 888 GTLVSATDLGVKGSCIYFTREEY--KSLYRFDMDDGSITVTLPCSKKFSHWVQPFWMVP- 1058
G +A + V+G+C+Y Y + +Y+F +DD +I++ + + FW VP
Sbjct: 259 GFSCTAMEGLVQGNCVYIVWSGYDCERIYKFCLDDMTISLQPILAHPTEDLRRGFWSVPA 318
Query: 1059 --------------HCKVQEKKDLAKVEKARDG-GHMTSNWNXXXXXXXXXXXXXXXXGD 1193
HC E L K D + ++W D
Sbjct: 319 GIEATELVQSAPSIHCDT-EVNVLNNFNKDEDAQATIKASWQDLPIEMLELIVSNLSLVD 377
Query: 1194 CIRFRLTCKTWISINQPIRSYPQLILSNSGSQQIPWLLSFSKKTKGACKFYHPIFSYAYT 1373
+RF CK W S++ P+ ++ PWL+ ++ GACK + P+ Y+
Sbjct: 378 RLRFPSVCKQWSSVSNPVAQ----------AKVWPWLMHCVRQD-GACKMFDPLCGVEYS 426
Query: 1374 MNIPDL---EGMIVRHANFGWLLLSKGNRSIFFFNPTTMETIKLPDYKSADVNCYMFEFV 1544
M + E R + GW+++++ + +IF NP T E +KL + + F
Sbjct: 427 MKVGPFDANERQAFRFSKDGWVIVTQSDDNIFVINPFTKEIVKL------SMASGWYRFT 480
Query: 1545 NISFSSPPTSSDCMVFG 1595
ISFSS PTS DC+ G
Sbjct: 481 GISFSSVPTSPDCVFLG 497
Score = 93.2 bits (230), Expect = 3e-16
Identities = 54/175 (30%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Frame = +3
Query: 1644 QQDTWFDFIYKSKVPCDFMASHCNPVFYEGVFYCLGKNGKVGIFDPREEDYKEVWKVLPV 1823
++D W +F +++ F + NPV++ G FY LG+ G + +F+P +++ + K P+
Sbjct: 575 EEDYWSEFDFENDEVM-FPVARNNPVYFRGEFYFLGQRGNLSVFNPGNNEWRILDKPEPI 633
Query: 1824 QAVLSFKNIENHMTSVKSFLVEYGGEILSFFVP-VNKPITAFKLDLSEKKWVRVESLGDK 2000
+A L+ + ++VE GE+++ F N+P KLD S+ +WV +E +G
Sbjct: 634 RADLTPYDEGKEAC----YMVELRGELIAVFHRNANEPPRVLKLDESKMEWVEIEDIGGG 689
Query: 2001 VAFLSHTTSMLVPAGVKGIENRIYLPKF--HGQDIMYYSLSTGSYS--YFGKKDP 2153
FL + S+ +P+ G NRIY PKF G+ ++Y L YS ++G K+P
Sbjct: 690 ALFLDYRASIALPSSEAGHGNRIYFPKFSEDGKKAIFYDLEAKKYSPMFYGAKEP 744
>ref|XP_002318771.1| predicted protein [Populus trichocarpa] gi|222859444|gb|EEE96991.1|
predicted protein [Populus trichocarpa]
Length = 329
Score = 135 bits (341), Expect = 3e-29
Identities = 97/339 (28%), Positives = 170/339 (50%), Gaps = 25/339 (7%)
Frame = +3
Query: 117 EVMDMDAGKKRPVRLTPPTYA--PSLVFLHGKRERDQVFCTLSDRCCHDRSVREMRGMKC 290
EV + +++ ++ PP P LVF HG E+ Q F +S+ CH +++ ++G K
Sbjct: 2 EVNTTEEEEEQSLQCWPPAVGLLPCLVFFHGSSEKGQTFYDISECRCHVKNIPGLQG-KL 60
Query: 291 VASC-YGWLILK-SFYSNQCYLFDPVSVTNIHLPPLIHK-SFEVGVLTCHPSNPNCAVLF 461
+ +C YGWL++ S+ C+L +P+S I LP L ++ VL+ P P C V+F
Sbjct: 61 IGTCSYGWLVIAGDSISDDCFLLNPISTKKIQLPSLAPDFTWTDCVLSSPPHRPECVVMF 120
Query: 462 VS------NAKKSFIYCRIGDNKWIERKL----VWRENS----RKVVPYGDVSVTSCEEK 599
++ N K C+ GD +W + L W ++S V GD+ + +C E
Sbjct: 121 LNFGYGILNVKS----CKPGDVEWTGQDLELHDEWFDDSDCGVSVGVHNGDIYILTCYEH 176
Query: 600 IYMFFIN---GMVVIDVRDTPASVCILKVERCEFSIPDYLAHTNYYVESCGEIFRV-CLL 767
+Y N G+ ++D++ + + + + P YL VE+CGE RV C +
Sbjct: 177 LYSVKFNKSCGITLVDLKVDDRTSPLTR--KFHSYCPTYL------VETCGEFLRVHCYI 228
Query: 768 HLGSTNLIQSVEVFKLDFSRMCWAKVENVGNQIFLLGPSCGTLV--SATDLGVKGSCIYF 941
G + + V+KLDF+ W +++N+ +Q +G S ++ S + ++G+ IY
Sbjct: 229 LHGQ---LMDISVYKLDFNERVWIRIKNLKDQAIFIGSSGAQVLACSTKESRIQGNRIYL 285
Query: 942 TREEYKSLYRFDMDDGSITVTLPCSKKFSHWVQPFWMVP 1058
T E ++LY +D+D + V LPC + W+Q W++P
Sbjct: 286 TLPEDRTLYVYDLDLCGLEVCLPCPNVKADWIQNDWILP 324