BLASTX nr result

ID: Coptis23_contig00020083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020083
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517062.1| meiotic recombination protein dmc1, putative...   367   1e-99
gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP9...   365   2e-99
ref|NP_188928.2| meiotic recombination protein DMC1-like protein...   363   9e-99
dbj|BAB03033.1| AtDMC1 (meiotic recombination protein)-like prot...   363   9e-99
ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic reco...   362   2e-98

>ref|XP_002517062.1| meiotic recombination protein dmc1, putative [Ricinus communis]
           gi|223543697|gb|EEF45225.1| meiotic recombination
           protein dmc1, putative [Ricinus communis]
          Length = 353

 Score =  367 bits (941), Expect = 1e-99
 Identities = 182/197 (92%), Positives = 192/197 (97%)
 Frame = -1

Query: 593 LMMQTKKSLTGIKGLSEAKVEKICEAAEKLVNFGYVTGSDVLLKRKSVVRITTGSQALDD 414
           LMM TKK+LTGIKGLSEAKV+KICEAAEK+VNFGY+TGSD LL+RK VVRITTGSQALD+
Sbjct: 58  LMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYITGSDALLRRKQVVRITTGSQALDE 117

Query: 413 LLGGGIETMCITEAFGEFRSGKTQLAHTLCVTTQLPVNMKGGNGKVAYIDTEGTFRPDRI 234
           LLGGGIET+CITEAFGEFRSGKTQLAHTLCV+TQLP NM+GGNGKVAYIDTEGTFRPDRI
Sbjct: 118 LLGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRI 177

Query: 233 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSVIALFRVD 54
           VPIAERFGMD GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR+LIVDSVIALFRVD
Sbjct: 178 VPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVD 237

Query: 53  FTGRGELAERQQKLAQM 3
           FTGRGELAERQQKLAQM
Sbjct: 238 FTGRGELAERQQKLAQM 254


>gb|ABP98984.1| DMC1 [Hieracium caespitosum] gi|145952328|gb|ABP98985.1| DMC1
           [Hieracium caespitosum]
          Length = 343

 Score =  365 bits (938), Expect = 2e-99
 Identities = 183/197 (92%), Positives = 193/197 (97%)
 Frame = -1

Query: 593 LMMQTKKSLTGIKGLSEAKVEKICEAAEKLVNFGYVTGSDVLLKRKSVVRITTGSQALDD 414
           LMM TKK+LTGIKGLSEAKV+KICEAAEK+VNFGY+TGSD LL+RK+VVRITTGSQALD+
Sbjct: 57  LMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYITGSDALLRRKAVVRITTGSQALDE 116

Query: 413 LLGGGIETMCITEAFGEFRSGKTQLAHTLCVTTQLPVNMKGGNGKVAYIDTEGTFRPDRI 234
           LLGGGIET+ ITEAFGEFRSGKTQLAHTLCV+TQLP NMKGGNGKVAYIDTEGTFRPDRI
Sbjct: 117 LLGGGIETLQITEAFGEFRSGKTQLAHTLCVSTQLPTNMKGGNGKVAYIDTEGTFRPDRI 176

Query: 233 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSVIALFRVD 54
           VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR+LIVDSVIALFRVD
Sbjct: 177 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVD 236

Query: 53  FTGRGELAERQQKLAQM 3
           FTGRGELAERQQKLAQM
Sbjct: 237 FTGRGELAERQQKLAQM 253


>ref|NP_188928.2| meiotic recombination protein DMC1-like protein [Arabidopsis
           thaliana] gi|21903409|sp|Q39009.2|DMC1_ARATH RecName:
           Full=Meiotic recombination protein DMC1 homolog
           gi|1790922|gb|AAC49617.1| AtDMC1 [Arabidopsis thaliana]
           gi|66792672|gb|AAY56438.1| At3g22880 [Arabidopsis
           thaliana] gi|332643166|gb|AEE76687.1| meiotic
           recombination protein DMC1-like protein [Arabidopsis
           thaliana]
          Length = 344

 Score =  363 bits (933), Expect = 9e-99
 Identities = 182/197 (92%), Positives = 190/197 (96%)
 Frame = -1

Query: 593 LMMQTKKSLTGIKGLSEAKVEKICEAAEKLVNFGYVTGSDVLLKRKSVVRITTGSQALDD 414
           LMM TKK+LTGIKGLSEAKV+KICEAAEK+VNFGY+TGSD L+KRKSVV+ITTG QALDD
Sbjct: 58  LMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDD 117

Query: 413 LLGGGIETMCITEAFGEFRSGKTQLAHTLCVTTQLPVNMKGGNGKVAYIDTEGTFRPDRI 234
           LLGGGIET  ITEAFGEFRSGKTQLAHTLCVTTQLP NMKGGNGKVAYIDTEGTFRPDRI
Sbjct: 118 LLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRI 177

Query: 233 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSVIALFRVD 54
           VPIAERFGMD GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDS+IALFRVD
Sbjct: 178 VPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVD 237

Query: 53  FTGRGELAERQQKLAQM 3
           FTGRGELA+RQQKLAQM
Sbjct: 238 FTGRGELADRQQKLAQM 254


>dbj|BAB03033.1| AtDMC1 (meiotic recombination protein)-like protein [Arabidopsis
           thaliana]
          Length = 332

 Score =  363 bits (933), Expect = 9e-99
 Identities = 182/197 (92%), Positives = 190/197 (96%)
 Frame = -1

Query: 593 LMMQTKKSLTGIKGLSEAKVEKICEAAEKLVNFGYVTGSDVLLKRKSVVRITTGSQALDD 414
           LMM TKK+LTGIKGLSEAKV+KICEAAEK+VNFGY+TGSD L+KRKSVV+ITTG QALDD
Sbjct: 46  LMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDD 105

Query: 413 LLGGGIETMCITEAFGEFRSGKTQLAHTLCVTTQLPVNMKGGNGKVAYIDTEGTFRPDRI 234
           LLGGGIET  ITEAFGEFRSGKTQLAHTLCVTTQLP NMKGGNGKVAYIDTEGTFRPDRI
Sbjct: 106 LLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRI 165

Query: 233 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSVIALFRVD 54
           VPIAERFGMD GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDS+IALFRVD
Sbjct: 166 VPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVD 225

Query: 53  FTGRGELAERQQKLAQM 3
           FTGRGELA+RQQKLAQM
Sbjct: 226 FTGRGELADRQQKLAQM 242


>ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein DMC1
           homolog [Vitis vinifera]
          Length = 361

 Score =  362 bits (930), Expect = 2e-98
 Identities = 181/197 (91%), Positives = 192/197 (97%)
 Frame = -1

Query: 593 LMMQTKKSLTGIKGLSEAKVEKICEAAEKLVNFGYVTGSDVLLKRKSVVRITTGSQALDD 414
           LMM TKK+LTGIKGLSEAKV+KICEAAEK+VNFGY+TGSD LL+RKSVVRITTGSQALD+
Sbjct: 58  LMMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYITGSDALLRRKSVVRITTGSQALDE 117

Query: 413 LLGGGIETMCITEAFGEFRSGKTQLAHTLCVTTQLPVNMKGGNGKVAYIDTEGTFRPDRI 234
           LLGGGIET  ITEAFGEFRSGKTQLAHTLCV+TQLP +M+GGNGKVAYIDTEGTFRPDRI
Sbjct: 118 LLGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRI 177

Query: 233 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSVIALFRVD 54
           VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR+LIVDSVIALFRVD
Sbjct: 178 VPIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVD 237

Query: 53  FTGRGELAERQQKLAQM 3
           FTGRGELA+RQQKLAQM
Sbjct: 238 FTGRGELADRQQKLAQM 254


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