BLASTX nr result

ID: Coptis23_contig00020077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020077
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002324922.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   135   5e-30
ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   133   1e-29
ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   132   2e-29

>ref|XP_002309685.1| predicted protein [Populus trichocarpa] gi|222855661|gb|EEE93208.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/88 (71%), Positives = 72/88 (81%)
 Frame = +2

Query: 2   FLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKSKDSGDCQCIAHRVFSGVL 181
           FLYSWWQHSANLASYEQQDAHEFFISVLD IHERE + +  +KD+GDCQCIAHRVFSG+L
Sbjct: 254 FLYSWWQHSANLASYEQQDAHEFFISVLDGIHEREGKERNPNKDNGDCQCIAHRVFSGML 313

Query: 182 RSDVXXXXXXXXXXXYDPCLDISLNLET 265
           RSD+           YDPC+DISLN++T
Sbjct: 314 RSDLTCTTCGFTSTTYDPCVDISLNMDT 341


>ref|XP_002324922.1| predicted protein [Populus trichocarpa] gi|222866356|gb|EEF03487.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/88 (71%), Positives = 71/88 (80%)
 Frame = +2

Query: 2   FLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKSKDSGDCQCIAHRVFSGVL 181
           FLYSWWQHSANLASYEQQDAHEFFISVLD IHERE + +  +KD+G CQCIAHRVFSG+L
Sbjct: 179 FLYSWWQHSANLASYEQQDAHEFFISVLDGIHEREGKERSSNKDNGGCQCIAHRVFSGML 238

Query: 182 RSDVXXXXXXXXXXXYDPCLDISLNLET 265
           RSDV           YDPC+DISLN++T
Sbjct: 239 RSDVTCTTCGFTSTTYDPCVDISLNMDT 266


>ref|XP_004145492.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449515075|ref|XP_004164575.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 552

 Score =  135 bits (339), Expect = 5e-30
 Identities = 61/88 (69%), Positives = 71/88 (80%)
 Frame = +2

Query: 2   FLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKSKDSGDCQCIAHRVFSGVL 181
           FLYSWWQHSANLA YEQQDAHEFFISVLDRIHERE +++ + K++GDC+CIAHR FSG L
Sbjct: 251 FLYSWWQHSANLACYEQQDAHEFFISVLDRIHERERKSRSQDKENGDCKCIAHRAFSGQL 310

Query: 182 RSDVXXXXXXXXXXXYDPCLDISLNLET 265
           RSDV           YDPC+DISL+L+T
Sbjct: 311 RSDVTCMTCGFTSTTYDPCVDISLDLDT 338


>ref|XP_003550210.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 555

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/88 (69%), Positives = 70/88 (79%)
 Frame = +2

Query: 2   FLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKSKDSGDCQCIAHRVFSGVL 181
           FLYSWWQHSANLA YEQQDAHEFFIS+LD IHE+E +T+  SK +GDCQCIAH+VF G+L
Sbjct: 255 FLYSWWQHSANLACYEQQDAHEFFISMLDAIHEKESKTRNGSKGNGDCQCIAHKVFYGLL 314

Query: 182 RSDVXXXXXXXXXXXYDPCLDISLNLET 265
           RSDV           YDPC+DISLNL+T
Sbjct: 315 RSDVTCMACGFTSTTYDPCVDISLNLDT 342


>ref|XP_003544592.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 554

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/88 (69%), Positives = 70/88 (79%)
 Frame = +2

Query: 2   FLYSWWQHSANLASYEQQDAHEFFISVLDRIHEREERTKPKSKDSGDCQCIAHRVFSGVL 181
           FLYSWWQHSANLA YEQQDAHEFFIS+LD IHE+E +T+  SK +GDCQCIAH+VF G+L
Sbjct: 254 FLYSWWQHSANLACYEQQDAHEFFISMLDAIHEKEGKTRNGSKGNGDCQCIAHKVFYGLL 313

Query: 182 RSDVXXXXXXXXXXXYDPCLDISLNLET 265
           RSDV           YDPC+DISLNL+T
Sbjct: 314 RSDVTCMACGFTSTTYDPCVDISLNLDT 341


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