BLASTX nr result

ID: Coptis23_contig00020071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020071
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   114   1e-23
gb|AFW86296.1| hypothetical protein ZEAMMB73_105589 [Zea mays]        108   5e-22
gb|AFW86295.1| hypothetical protein ZEAMMB73_105589 [Zea mays]        108   5e-22
ref|NP_001167810.1| uncharacterized protein LOC100381508 [Zea ma...   108   5e-22
ref|XP_002534298.1| conserved hypothetical protein [Ricinus comm...   106   2e-21

>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
            gi|297745068|emb|CBI38660.3| unnamed protein product
            [Vitis vinifera]
          Length = 1036

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
 Frame = -3

Query: 300  QNEN-GSKSQENIDGSVEASLGFDDGEEGLAIRIATEVVSFPMKKTAAGKAYMSALCKTA 124
            QNEN  ++  E +DG  E SL F+ GEEGLAIRIA EVVSF  KKT A K+Y+SALC+  
Sbjct: 804  QNENQNNELPEVLDGFSEPSLDFECGEEGLAIRIAAEVVSFHAKKTPAQKSYVSALCRVL 863

Query: 123  VLLHFRSSEQAAIKVMRGLLNRVIESVLQDKELVKDLKCLA 1
            VLLHFR SEQ AIK+MR LLNRV ES   ++E+VK+LK +A
Sbjct: 864  VLLHFRLSEQGAIKLMRRLLNRVAESAFAEREVVKELKRMA 904


>gb|AFW86296.1| hypothetical protein ZEAMMB73_105589 [Zea mays]
          Length = 1047

 Score =  108 bits (270), Expect = 5e-22
 Identities = 60/98 (61%), Positives = 67/98 (68%)
 Frame = -3

Query: 294  ENGSKSQENIDGSVEASLGFDDGEEGLAIRIATEVVSFPMKKTAAGKAYMSALCKTAVLL 115
            +  SKS E+  G  +AS  FD  EEGLAIRIA EV S P KKTAAGKAY  ALCK  VLL
Sbjct: 809  DQASKSSESASGLADASNNFDISEEGLAIRIALEVASCPDKKTAAGKAYALALCKVVVLL 868

Query: 114  HFRSSEQAAIKVMRGLLNRVIESVLQDKELVKDLKCLA 1
             FR SEQ AIK MRGL+N +  SV  DKEL K+L  +A
Sbjct: 869  RFRQSEQKAIKCMRGLVNHLAASVASDKELGKELAQMA 906


>gb|AFW86295.1| hypothetical protein ZEAMMB73_105589 [Zea mays]
          Length = 1048

 Score =  108 bits (270), Expect = 5e-22
 Identities = 60/98 (61%), Positives = 67/98 (68%)
 Frame = -3

Query: 294  ENGSKSQENIDGSVEASLGFDDGEEGLAIRIATEVVSFPMKKTAAGKAYMSALCKTAVLL 115
            +  SKS E+  G  +AS  FD  EEGLAIRIA EV S P KKTAAGKAY  ALCK  VLL
Sbjct: 810  DQASKSSESASGLADASNNFDISEEGLAIRIALEVASCPDKKTAAGKAYALALCKVVVLL 869

Query: 114  HFRSSEQAAIKVMRGLLNRVIESVLQDKELVKDLKCLA 1
             FR SEQ AIK MRGL+N +  SV  DKEL K+L  +A
Sbjct: 870  RFRQSEQKAIKCMRGLVNHLAASVASDKELGKELAQMA 907


>ref|NP_001167810.1| uncharacterized protein LOC100381508 [Zea mays]
           gi|223944097|gb|ACN26132.1| unknown [Zea mays]
          Length = 286

 Score =  108 bits (270), Expect = 5e-22
 Identities = 60/98 (61%), Positives = 67/98 (68%)
 Frame = -3

Query: 294 ENGSKSQENIDGSVEASLGFDDGEEGLAIRIATEVVSFPMKKTAAGKAYMSALCKTAVLL 115
           +  SKS E+  G  +AS  FD  EEGLAIRIA EV S P KKTAAGKAY  ALCK  VLL
Sbjct: 48  DQASKSSESASGLADASNNFDISEEGLAIRIALEVASCPDKKTAAGKAYALALCKVVVLL 107

Query: 114 HFRSSEQAAIKVMRGLLNRVIESVLQDKELVKDLKCLA 1
            FR SEQ AIK MRGL+N +  SV  DKEL K+L  +A
Sbjct: 108 RFRQSEQKAIKCMRGLVNHLAASVASDKELGKELAQMA 145


>ref|XP_002534298.1| conserved hypothetical protein [Ricinus communis]
           gi|223525547|gb|EEF28084.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/101 (57%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = -3

Query: 300 QNENGSKS-QENIDGSVEASLGFDDGEEGLAIRIATEVVSFPMKKTAAGKAYMSALCKTA 124
           ++ENGS    E +D S+++S  F+ G+EGLAIRIA EV  F  KKT A ++Y+SAL +  
Sbjct: 196 EDENGSMEFPETVDSSLQSS--FECGDEGLAIRIAAEVAGFSGKKTPAERSYISALSRIV 253

Query: 123 VLLHFRSSEQAAIKVMRGLLNRVIESVLQDKELVKDLKCLA 1
           VLLHFRSSEQ A+K+MR LLNRV ESV+ DK+L+K+LK +A
Sbjct: 254 VLLHFRSSEQGAVKLMRRLLNRVAESVIADKDLMKELKRMA 294


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