BLASTX nr result

ID: Coptis23_contig00020060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020060
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16271.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Viti...   166   2e-39
emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]   166   2e-39
ref|XP_003606477.1| Defects in morphology protein-like protein [...   157   7e-37
ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glyc...   157   9e-37

>emb|CBI16271.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/123 (62%), Positives = 96/123 (78%)
 Frame = +3

Query: 3   QGLTRELPLFGFVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKL 182
           +GLTRELPL GFV+GVWMVGVIDEIR+P T++  +P LVE KTR QA  PAE Q+RNG+L
Sbjct: 174 EGLTRELPLIGFVEGVWMVGVIDEIRMPETEANRNPILVETKTRAQARSPAEPQQRNGRL 233

Query: 183 QLMCYKYIWDNIVTNSFPTSPFYVFFGLKAQYILSEEVQDLAAASGFPAKTLNDLVVYYM 362
           QLMCYK +WD++  NSFP+  FY FF L   YILSEE+++    SGFPA+TL+DL+ Y+ 
Sbjct: 234 QLMCYKRLWDSLAANSFPSRQFYDFFALNPHYILSEEIRENTVNSGFPAETLDDLLRYFS 293

Query: 363 NTC 371
           N C
Sbjct: 294 NMC 296


>ref|XP_002284918.1| PREDICTED: probable exonuclease V-like [Vitis vinifera]
          Length = 442

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/123 (62%), Positives = 96/123 (78%)
 Frame = +3

Query: 3   QGLTRELPLFGFVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKL 182
           +GLTRELPL GFV+GVWMVGVIDEIR+P T++  +P LVE KTR QA  PAE Q+RNG+L
Sbjct: 237 EGLTRELPLIGFVEGVWMVGVIDEIRMPETEANRNPILVETKTRAQARSPAEPQQRNGRL 296

Query: 183 QLMCYKYIWDNIVTNSFPTSPFYVFFGLKAQYILSEEVQDLAAASGFPAKTLNDLVVYYM 362
           QLMCYK +WD++  NSFP+  FY FF L   YILSEE+++    SGFPA+TL+DL+ Y+ 
Sbjct: 297 QLMCYKRLWDSLAANSFPSRQFYDFFALNPHYILSEEIRENTVNSGFPAETLDDLLRYFS 356

Query: 363 NTC 371
           N C
Sbjct: 357 NMC 359


>emb|CAN60322.1| hypothetical protein VITISV_002856 [Vitis vinifera]
          Length = 402

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/123 (62%), Positives = 96/123 (78%)
 Frame = +3

Query: 3   QGLTRELPLFGFVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKL 182
           +GLTRELPL GFV+GVWMVGVIDEIR+P T++  +P LVE KTR QA  PAE Q+RNG+L
Sbjct: 197 EGLTRELPLIGFVEGVWMVGVIDEIRMPETEANRNPILVETKTRAQARSPAEPQQRNGRL 256

Query: 183 QLMCYKYIWDNIVTNSFPTSPFYVFFGLKAQYILSEEVQDLAAASGFPAKTLNDLVVYYM 362
           QLMCYK +WD++  NSFP+  FY FF L   YILSEE+++    SGFPA+TL+DL+ Y+ 
Sbjct: 257 QLMCYKRLWDSLAANSFPSRQFYDFFALNPHYILSEEIRENTXNSGFPAETLDDLLRYFS 316

Query: 363 NTC 371
           N C
Sbjct: 317 NMC 319


>ref|XP_003606477.1| Defects in morphology protein-like protein [Medicago truncatula]
           gi|357472389|ref|XP_003606479.1| Defects in morphology
           protein-like protein [Medicago truncatula]
           gi|355507532|gb|AES88674.1| Defects in morphology
           protein-like protein [Medicago truncatula]
           gi|355507534|gb|AES88676.1| Defects in morphology
           protein-like protein [Medicago truncatula]
          Length = 407

 Score =  157 bits (398), Expect = 7e-37
 Identities = 69/122 (56%), Positives = 97/122 (79%)
 Frame = +3

Query: 3   QGLTRELPLFGFVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKL 182
           +GLTRELP+ GF + +WMVG+IDE+R+P T++  +P L++ KTR + TLPAE Q+RNG+L
Sbjct: 191 EGLTRELPIIGFAEDIWMVGIIDEVRMPLTENDHNPILIDTKTRARDTLPAEPQRRNGRL 250

Query: 183 QLMCYKYIWDNIVTNSFPTSPFYVFFGLKAQYILSEEVQDLAAASGFPAKTLNDLVVYYM 362
           QLMCYKY+WDN+V ++FP+  F+ +FGL  Q IL E+++ L+A SGF A TL+D+V YY 
Sbjct: 251 QLMCYKYMWDNLVADNFPSKDFFTYFGLNPQSILCEDLRVLSADSGFSATTLDDVVRYYR 310

Query: 363 NT 368
           NT
Sbjct: 311 NT 312


>ref|XP_003538045.1| PREDICTED: probable exonuclease V-like [Glycine max]
          Length = 388

 Score =  157 bits (397), Expect = 9e-37
 Identities = 70/123 (56%), Positives = 94/123 (76%)
 Frame = +3

Query: 3   QGLTRELPLFGFVQGVWMVGVIDEIRLPATDSVLSPFLVENKTRYQATLPAEAQKRNGKL 182
           +GLTRELP+ GF + +WMVGVIDEIR+P T++  +P L++ KTR + TLPAE Q+RNG+L
Sbjct: 173 EGLTRELPVIGFAEDIWMVGVIDEIRMPLTENDHNPILIDTKTRSRDTLPAEPQRRNGRL 232

Query: 183 QLMCYKYIWDNIVTNSFPTSPFYVFFGLKAQYILSEEVQDLAAASGFPAKTLNDLVVYYM 362
           QLMCYKY+WDN+V + FP+  F+ +FGL  Q  L E+++ + A SGF A TL+D V YY 
Sbjct: 233 QLMCYKYLWDNLVADDFPSEKFFTYFGLNPQNNLCEDLKVIGADSGFSASTLDDAVRYYR 292

Query: 363 NTC 371
           NTC
Sbjct: 293 NTC 295


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