BLASTX nr result

ID: Coptis23_contig00020056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020056
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329553.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_003631456.1| PREDICTED: uncharacterized protein LOC100853...   152   3e-35
emb|CBI23385.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002275217.1| PREDICTED: uncharacterized protein LOC100256...   149   4e-34
ref|XP_002524367.1| conserved hypothetical protein [Ricinus comm...   147   1e-33

>ref|XP_002329553.1| predicted protein [Populus trichocarpa] gi|222870262|gb|EEF07393.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/105 (73%), Positives = 92/105 (87%)
 Frame = +3

Query: 30  AFMLLLGVCIIVGMLETAVVDALLNESQCKEERRIGINACKPVIYGKLPTAECCERVRVS 209
           +F+LL  V +++GM E    DA L+ +QCKEERR+G+NACKPVIYGKLP+  CCERVRVS
Sbjct: 8   SFILL--VVVVLGMWEVNKADAALSAAQCKEERRLGLNACKPVIYGKLPSPACCERVRVS 65

Query: 210 HVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 344
           HVECVCPVITPKLAAL+D++RAI+LI+GCGR VPRHFKCGSITTP
Sbjct: 66  HVECVCPVITPKLAALIDLDRAIRLIEGCGRRVPRHFKCGSITTP 110


>ref|XP_003631456.1| PREDICTED: uncharacterized protein LOC100853134 [Vitis vinifera]
          Length = 111

 Score =  152 bits (385), Expect = 3e-35
 Identities = 70/109 (64%), Positives = 88/109 (80%)
 Frame = +3

Query: 18  GISVAFMLLLGVCIIVGMLETAVVDALLNESQCKEERRIGINACKPVIYGKLPTAECCER 197
           G S   M++L V +++GM E     A  + ++CKEERR+ INACKPV+YGK P+  CCER
Sbjct: 4   GKSWGVMVVL-VVLLLGMWEVKTGSAAPSAAECKEERRLAINACKPVVYGKDPSPACCER 62

Query: 198 VRVSHVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 344
            RV+H+ECVCPVITPKLAAL+DVNRA++LI+GCGR VPRH+KCGSITTP
Sbjct: 63  ARVTHIECVCPVITPKLAALIDVNRAVRLIEGCGRKVPRHYKCGSITTP 111


>emb|CBI23385.3| unnamed protein product [Vitis vinifera]
          Length = 109

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/111 (63%), Positives = 90/111 (81%)
 Frame = +3

Query: 12  MKGISVAFMLLLGVCIIVGMLETAVVDALLNESQCKEERRIGINACKPVIYGKLPTAECC 191
           MKG +   M+++ V  +VGM E  +  A+ + + CKEERR+ INACKP++YGK PT  CC
Sbjct: 1   MKGKTWGVMVVM-VVAVVGMWEVKMCGAV-SGADCKEERRVAINACKPILYGKDPTPACC 58

Query: 192 ERVRVSHVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 344
           ER+RV+H+ECVCPVITPKLAALVDVNR ++LI+GCGR VPRH+KCGSITTP
Sbjct: 59  ERIRVTHIECVCPVITPKLAALVDVNRMVRLIEGCGRNVPRHYKCGSITTP 109


>ref|XP_002275217.1| PREDICTED: uncharacterized protein LOC100256037 [Vitis vinifera]
          Length = 112

 Score =  149 bits (375), Expect = 4e-34
 Identities = 66/109 (60%), Positives = 85/109 (77%)
 Frame = +3

Query: 18  GISVAFMLLLGVCIIVGMLETAVVDALLNESQCKEERRIGINACKPVIYGKLPTAECCER 197
           G S   M++L V ++VGM E     A  + ++CKEE R+ I ACKPV+YG  P+  CCER
Sbjct: 4   GKSCGVMVVLVVVLVVGMWEVKTSSAAPSAAECKEETRLAIKACKPVVYGMDPSPACCER 63

Query: 198 VRVSHVECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 344
            RV+HVECVCP+ITPKLAAL+DVN+A+++I+GCGR VPRH+KCGSITTP
Sbjct: 64  ARVTHVECVCPLITPKLAALIDVNKAVRVIEGCGRKVPRHYKCGSITTP 112


>ref|XP_002524367.1| conserved hypothetical protein [Ricinus communis]
           gi|223536328|gb|EEF37978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 123

 Score =  147 bits (371), Expect = 1e-33
 Identities = 65/104 (62%), Positives = 86/104 (82%)
 Frame = +3

Query: 33  FMLLLGVCIIVGMLETAVVDALLNESQCKEERRIGINACKPVIYGKLPTAECCERVRVSH 212
           F+LL+ V  IV   E    +A  + +QCKEERR+G+NACKPV+YG+ P+ +CC+R+RV+H
Sbjct: 11  FVLLVAVLSIV---EVKTANAAPSAAQCKEERRLGLNACKPVVYGRPPSPQCCQRIRVTH 67

Query: 213 VECVCPVITPKLAALVDVNRAIKLIQGCGRPVPRHFKCGSITTP 344
           +ECVCPV+TPKLAAL+DVNRAI++I+GCGR VPRHFKCGS  +P
Sbjct: 68  IECVCPVVTPKLAALIDVNRAIRVIEGCGRRVPRHFKCGSKLSP 111


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