BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020054
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16853.1| unknown [Picea sitchensis]                             116   2e-24
ref|XP_002513521.1| transcription initiation factor iib, putativ...   114   6e-24
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   114   8e-24
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   114   8e-24
emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]   114   8e-24

>gb|ABR16853.1| unknown [Picea sitchensis]
          Length = 313

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/62 (91%), Positives = 58/62 (93%)
 Frame = -2

Query: 187 RWQNRGSNPDRSLIMAFKSIAVMSDRLNLVATIKDRANEIYKKVEDQKSIRGRNQDAILA 8
           RWQNRGSNPDRSLIMAFK+I  MSDRL LVATIKDRANEIYKKVED KSIRGRNQDAILA
Sbjct: 94  RWQNRGSNPDRSLIMAFKTIGTMSDRLGLVATIKDRANEIYKKVEDSKSIRGRNQDAILA 153

Query: 7   AC 2
           AC
Sbjct: 154 AC 155


>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = -2

Query: 187 RWQNRGSNPDRSLIMAFKSIAVMSDRLNLVATIKDRANEIYKKVEDQKSIRGRNQDAILA 8
           RWQNRGSNPDRSLI AFK+IA MSDRL LVATIKDRANEIYKKVEDQK +RGRNQDA+LA
Sbjct: 93  RWQNRGSNPDRSLIQAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKPLRGRNQDAVLA 152

Query: 7   AC 2
           AC
Sbjct: 153 AC 154


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = -2

Query: 187 RWQNRGSNPDRSLIMAFKSIAVMSDRLNLVATIKDRANEIYKKVEDQKSIRGRNQDAILA 8
           RWQNRGSNPDR LI+AFK+IA MSDRL LVATIKDRANEIYKKVEDQKS RGRNQDA+LA
Sbjct: 93  RWQNRGSNPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKSTRGRNQDALLA 152

Query: 7   AC 2
           AC
Sbjct: 153 AC 154


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = -2

Query: 187 RWQNRGSNPDRSLIMAFKSIAVMSDRLNLVATIKDRANEIYKKVEDQKSIRGRNQDAILA 8
           RWQNRGSNPDR LI+AFK+IA MSDRL LVATIKDRANEIYKKVEDQKS RGRNQDA+LA
Sbjct: 93  RWQNRGSNPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKSTRGRNQDALLA 152

Query: 7   AC 2
           AC
Sbjct: 153 AC 154


>emb|CAN74371.1| hypothetical protein VITISV_004775 [Vitis vinifera]
          Length = 312

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = -2

Query: 187 RWQNRGSNPDRSLIMAFKSIAVMSDRLNLVATIKDRANEIYKKVEDQKSIRGRNQDAILA 8
           RWQNRGSNPDR LI+AFK+IA MSDRL LVATIKDRANEIYKKVEDQKS RGRNQDA+LA
Sbjct: 93  RWQNRGSNPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKKVEDQKSTRGRNQDALLA 152

Query: 7   AC 2
           AC
Sbjct: 153 AC 154