BLASTX nr result

ID: Coptis23_contig00020047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020047
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTR...    56   3e-06
ref|XP_002307155.1| predicted protein [Populus trichocarpa] gi|1...    55   6e-06

>ref|XP_002266745.1| PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4 [Vitis vinifera]
          Length = 550

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 14  LDGKKKNNKGSQGRWFFRRRCPCSGKKSVQIEEKCSEPKITIHSNCNSSASLNLHSKQSS 193
           +  +KKN  G   +WFF R+CPCSGKK+V+I+EK SEP+  I  N N  +     +++SS
Sbjct: 150 IGSEKKNVSGR--KWFFGRKCPCSGKKAVEIQEKVSEPRSPIRLNHNLGSDPKRPTERSS 207


>ref|XP_002307155.1| predicted protein [Populus trichocarpa] gi|118485620|gb|ABK94660.1|
           unknown [Populus trichocarpa]
           gi|222856604|gb|EEE94151.1| predicted protein [Populus
           trichocarpa]
          Length = 551

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/46 (54%), Positives = 31/46 (67%)
 Frame = +2

Query: 38  KGSQGRWFFRRRCPCSGKKSVQIEEKCSEPKITIHSNCNSSASLNL 175
           KGS  +W  RR+CPCSGKKSVQIEEK SEP+     +     S++L
Sbjct: 167 KGSGTKWLLRRKCPCSGKKSVQIEEKLSEPRTLSRISHTKGLSVDL 212


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