BLASTX nr result

ID: Coptis23_contig00020046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020046
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269135.1| PREDICTED: uncharacterized protein LOC100244...   162   3e-38
emb|CAN62024.1| hypothetical protein VITISV_004927 [Vitis vinifera]   162   3e-38
ref|XP_002310994.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002316486.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002516628.1| conserved hypothetical protein [Ricinus comm...   139   2e-31

>ref|XP_002269135.1| PREDICTED: uncharacterized protein LOC100244711 [Vitis vinifera]
           gi|296084462|emb|CBI25021.3| unnamed protein product
           [Vitis vinifera]
          Length = 226

 Score =  162 bits (410), Expect = 3e-38
 Identities = 87/139 (62%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = +2

Query: 59  MGKKMRMPSLFKNKDTTRPFSWQWPSCKQPMTHSFRVNGDNTDHMFKTVNSVYYDAGDMV 238
           MGKKM++PSLFK K+T +P  WQWPSCK P T SFR   D    MFKTVNSV++D  D V
Sbjct: 1   MGKKMKLPSLFKAKETKQP--WQWPSCKHPKTLSFRAGDD----MFKTVNSVFFDPTDGV 54

Query: 239 TTPDSLFTNSSESASFSTVSDQDSTGESLEMVIRGMKSERLFFEPGATNSIL-EKSKDND 415
            TP+S FTN+SESASFST S+++   +S+E+VIRG++SERLFFEPG T+SIL EK+K  +
Sbjct: 55  ETPESWFTNTSESASFSTESEEEYGVKSVEVVIRGVQSERLFFEPGNTSSILEEKAKAAN 114

Query: 416 NGFLFKESVVMAMESDDPY 472
               FKESVV+AMES+DPY
Sbjct: 115 EIHPFKESVVLAMESEDPY 133


>emb|CAN62024.1| hypothetical protein VITISV_004927 [Vitis vinifera]
          Length = 226

 Score =  162 bits (409), Expect = 3e-38
 Identities = 87/139 (62%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = +2

Query: 59  MGKKMRMPSLFKNKDTTRPFSWQWPSCKQPMTHSFRVNGDNTDHMFKTVNSVYYDAGDMV 238
           MGKKM++PSLFK K+T +P  WQWPSCK P T SFR   D    MFKTVNSV++D  D V
Sbjct: 1   MGKKMKLPSLFKAKETKQP--WQWPSCKXPKTLSFRAGDD----MFKTVNSVFFDPTDGV 54

Query: 239 TTPDSLFTNSSESASFSTVSDQDSTGESLEMVIRGMKSERLFFEPGATNSIL-EKSKDND 415
            TP+S FTN+SESASFST S+++   +S+E+VIRG++SERLFFEPG T+SIL EK+K  +
Sbjct: 55  ETPESWFTNTSESASFSTESEEEYGVKSVEVVIRGVQSERLFFEPGNTSSILEEKAKAAN 114

Query: 416 NGFLFKESVVMAMESDDPY 472
               FKESVV+AMES+DPY
Sbjct: 115 EIHPFKESVVLAMESEDPY 133


>ref|XP_002310994.1| predicted protein [Populus trichocarpa] gi|222850814|gb|EEE88361.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score =  147 bits (372), Expect = 7e-34
 Identities = 82/135 (60%), Positives = 102/135 (75%), Gaps = 1/135 (0%)
 Frame = +2

Query: 71  MRMPSLFKNKDTTRPFSWQ-WPSCKQPMTHSFRVNGDNTDHMFKTVNSVYYDAGDMVTTP 247
           M++P+LFK K+T +  SWQ WPSCK P T SFR      D + KTVNSV++D  + V TP
Sbjct: 1   MKIPALFKIKETKQ--SWQKWPSCKHPKTLSFR----GGDDVIKTVNSVFFDPSERVETP 54

Query: 248 DSLFTNSSESASFSTVSDQDSTGESLEMVIRGMKSERLFFEPGATNSILEKSKDNDNGFL 427
           +S FTNSSE+ SFST S+    GESLE+V+RG++SERLFFEPG TNSILE++K    GF 
Sbjct: 55  ESWFTNSSETTSFSTESE-GFDGESLEVVVRGVRSERLFFEPGDTNSILEEAK--TGGFP 111

Query: 428 FKESVVMAMESDDPY 472
           FKESVV+AMES+DPY
Sbjct: 112 FKESVVLAMESEDPY 126


>ref|XP_002316486.1| predicted protein [Populus trichocarpa] gi|222865526|gb|EEF02657.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  142 bits (359), Expect = 2e-32
 Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = +2

Query: 71  MRMPSLFKNKDTTRPFSWQ-WPSCKQPMTHSFRVNGDNTDHMFKTVNSVYYDAGDMVTTP 247
           M++P+LF+ K+T    +WQ WPSCK P T SFR   D    + KTVNSV++D  + V TP
Sbjct: 1   MKIPTLFRGKETEH--TWQKWPSCKHPKTLSFRAGDD----VIKTVNSVFFDPSEGVETP 54

Query: 248 DSLFTNSSESASFSTVSDQDSTGESLEMVIRGMKSERLFFEPGATNSILEKSKDNDNGFL 427
           +S FT+SSE+ SFST S+ D  GESLE+V+RG++SERLFFEPG TNSILE++K    GF 
Sbjct: 55  ESWFTDSSETTSFSTESE-DYDGESLEVVVRGVRSERLFFEPGDTNSILEEAK--TGGFP 111

Query: 428 FKESVVMAMESDDPY 472
           FKESV + MES+DPY
Sbjct: 112 FKESVELEMESEDPY 126


>ref|XP_002516628.1| conserved hypothetical protein [Ricinus communis]
           gi|223544230|gb|EEF45752.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score =  139 bits (350), Expect = 2e-31
 Identities = 81/142 (57%), Positives = 95/142 (66%), Gaps = 10/142 (7%)
 Frame = +2

Query: 77  MPSLFKNKDTTRPFS---WQ-WPSCKQPMTHSFRVNGDNTDHMFKTVNSVYYDAGDMVT- 241
           +PSLFKNK+T        WQ WPSC  P T SFR      D +FKTVNSV++D    V  
Sbjct: 4   IPSLFKNKETRNRHHHQPWQKWPSCNYPKTLSFRA-----DDIFKTVNSVFFDPTTSVEH 58

Query: 242 -----TPDSLFTNSSESASFSTVSDQDSTGESLEMVIRGMKSERLFFEPGATNSILEKSK 406
                TP S FTNSSE+ SF T   +D  G+SLE+V+RG +SERLFFEPG TNSILEK+K
Sbjct: 59  VAEIETPKSWFTNSSEATSFPTDQSEDFGGDSLEVVVRGARSERLFFEPGDTNSILEKAK 118

Query: 407 DNDNGFLFKESVVMAMESDDPY 472
               GF F+ESVV+AMESDDPY
Sbjct: 119 --PGGFPFQESVVLAMESDDPY 138


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