BLASTX nr result

ID: Coptis23_contig00020040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020040
         (1604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516962.1| protein with unknown function [Ricinus commu...   551   e-154
ref|XP_003631946.1| PREDICTED: acyl-CoA dehydrogenase family mem...   549   e-154
ref|XP_002271622.1| PREDICTED: acyl-CoA dehydrogenase family mem...   549   e-154
ref|NP_187337.2| acyl-CoA dehydrogenase [Arabidopsis thaliana] g...   546   e-153
dbj|BAF01758.1| putative acetyl-coA dehydrogenase [Arabidopsis t...   546   e-153

>ref|XP_002516962.1| protein with unknown function [Ricinus communis]
            gi|223544050|gb|EEF45576.1| protein with unknown function
            [Ricinus communis]
          Length = 830

 Score =  551 bits (1421), Expect = e-154
 Identities = 268/405 (66%), Positives = 320/405 (79%), Gaps = 4/405 (0%)
 Frame = -2

Query: 1210 MASKTSELVGVVKSAHEFNLDSLIQYAKANILGFPSSPSKINLSQFGHGQSNPTYLIEVV 1031
            MA +T +L+  V++AHE + D+L++Y  +N+  FP SPS   + QFGHGQSNPT+L+E  
Sbjct: 1    MAIRTPDLLKPVQAAHELDRDALLRYISSNVADFPVSPSTFVVKQFGHGQSNPTFLLEA- 59

Query: 1030 SSGGDSIT--RYVLRKKPSGQLLQSAHAIDREFQVLKALGDHTDVPVPKVFCLCTDPSVI 857
               G+ +T  RYVLRKKP G+LLQSAHA+DRE+ VL+ALG+HTDVPVPKV+CLCTD SVI
Sbjct: 60   ---GNEVTVKRYVLRKKPPGKLLQSAHAVDREYMVLRALGEHTDVPVPKVYCLCTDASVI 116

Query: 856  GTDFYIMEFLEGRIFLDPALPGVPPNRRRAIYLEMSKTLASLHSVNVDTIGLRNYGRRDN 677
            GT FYIME+LEGRIF+DP LPGV P RRRAIYLE ++ LA+LH+ +VD IGL  YGRRDN
Sbjct: 117  GTAFYIMEYLEGRIFIDPTLPGVAPLRRRAIYLETARVLAALHTADVDAIGLGKYGRRDN 176

Query: 676  YCKRQVERWAKQYIASTGDGKPERNPKMLDLIQWLRQHVPFEDSSVTSGGLVHGDFRLDN 497
            YCKRQVERWAKQYI STG+GK  R PKMLDLI WL+Q++P EDS   S G+VHGDFR+DN
Sbjct: 177  YCKRQVERWAKQYIESTGEGKSPRYPKMLDLIHWLQQNIPPEDSLGASAGIVHGDFRIDN 236

Query: 496  LVFHPIEDRVIGILDWELSTLGNQMCDVAYNCVSYVVDIRLD--KLYSGFETRGTPEGIP 323
            +VFHP EDRVIGILDWELSTLGNQMCDVAY+C++Y+VDI LD  ++  GFE  G PEGIP
Sbjct: 237  VVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMAYLVDINLDNPQICKGFELTGIPEGIP 296

Query: 322  PQAEYLATYCSASAKPWPLANWKFYVAFSLFRGASIYAGVYHRWILGNASGGERAQNAER 143
             QAEYLA YCSAS KPWP   WKFYVAF +FRGASIYAGV+ RWI+GNA+GGERA+NA  
Sbjct: 297  SQAEYLAEYCSASGKPWPAREWKFYVAFGMFRGASIYAGVHSRWIMGNATGGERARNAGN 356

Query: 142  GANTLMDSAWLFINRRSVLPDQPPIVDDSVAGAYLKAFENKREAQ 8
             AN L+D AW FI+++SVLPDQPP         Y+  F    E Q
Sbjct: 357  QANGLIDFAWDFISKKSVLPDQPP--SAPTGRGYITQFGRDNEVQ 399


>ref|XP_003631946.1| PREDICTED: acyl-CoA dehydrogenase family member 10 isoform 2 [Vitis
            vinifera] gi|296083330|emb|CBI22966.3| unnamed protein
            product [Vitis vinifera]
          Length = 820

 Score =  549 bits (1415), Expect = e-154
 Identities = 258/380 (67%), Positives = 311/380 (81%)
 Frame = -2

Query: 1210 MASKTSELVGVVKSAHEFNLDSLIQYAKANILGFPSSPSKINLSQFGHGQSNPTYLIEVV 1031
            MAS+TS+L+G V  AH F+ ++L +Y+ AN+ GFP S S   +SQFGHGQSNPT+L+EV 
Sbjct: 1    MASRTSDLLGRVHPAHAFDFEALFRYSCANVDGFPVSSSSFTISQFGHGQSNPTFLMEVG 60

Query: 1030 SSGGDSITRYVLRKKPSGQLLQSAHAIDREFQVLKALGDHTDVPVPKVFCLCTDPSVIGT 851
              G  S+ RYV+RKKP G+LLQSAHA++REFQVL+ALG HT VPVPKVFCLC D SVIGT
Sbjct: 61   EGG--SLKRYVVRKKPPGKLLQSAHAVEREFQVLRALGLHTQVPVPKVFCLCIDTSVIGT 118

Query: 850  DFYIMEFLEGRIFLDPALPGVPPNRRRAIYLEMSKTLASLHSVNVDTIGLRNYGRRDNYC 671
             FYIME+LEGRIFLDP LPG+ PNRR AIY  ++K LA+LHS +VD+IGL  YG RD+YC
Sbjct: 119  AFYIMEYLEGRIFLDPKLPGITPNRRAAIYRAIAKALAALHSADVDSIGLEKYGHRDSYC 178

Query: 670  KRQVERWAKQYIASTGDGKPERNPKMLDLIQWLRQHVPFEDSSVTSGGLVHGDFRLDNLV 491
            KRQ+ERWAKQYIASTG+G+P  NPKM +LI WLRQH+P EDS   + GLVHGDFR+DNLV
Sbjct: 179  KRQIERWAKQYIASTGEGRPVGNPKMFELIDWLRQHIPLEDSRAVTTGLVHGDFRIDNLV 238

Query: 490  FHPIEDRVIGILDWELSTLGNQMCDVAYNCVSYVVDIRLDKLYSGFETRGTPEGIPPQAE 311
            FHPIEDRV+GILDWELSTLGNQMCDVA  C+ Y+ D+R D+L  GFE  G PEGIP Q+E
Sbjct: 239  FHPIEDRVVGILDWELSTLGNQMCDVANICLPYIKDLRPDRLDEGFEVTGIPEGIPSQSE 298

Query: 310  YLATYCSASAKPWPLANWKFYVAFSLFRGASIYAGVYHRWILGNASGGERAQNAERGANT 131
            YLA YCSA+ KPWP   WKFY+AF++FRGASI AGVY RWI+GNASGGERA++  R AN+
Sbjct: 299  YLAEYCSAAGKPWPGTAWKFYIAFNMFRGASILAGVYSRWIMGNASGGERAKHTGRVANS 358

Query: 130  LMDSAWLFINRRSVLPDQPP 71
            L+D+AW  I ++S+LP+ PP
Sbjct: 359  LIDTAWAVIEQKSLLPEHPP 378


>ref|XP_002271622.1| PREDICTED: acyl-CoA dehydrogenase family member 10 isoform 1 [Vitis
            vinifera]
          Length = 819

 Score =  549 bits (1415), Expect = e-154
 Identities = 258/380 (67%), Positives = 311/380 (81%)
 Frame = -2

Query: 1210 MASKTSELVGVVKSAHEFNLDSLIQYAKANILGFPSSPSKINLSQFGHGQSNPTYLIEVV 1031
            MAS+TS+L+G V  AH F+ ++L +Y+ AN+ GFP S S   +SQFGHGQSNPT+L+EV 
Sbjct: 1    MASRTSDLLGRVHPAHAFDFEALFRYSCANVDGFPVSSSSFTISQFGHGQSNPTFLMEVG 60

Query: 1030 SSGGDSITRYVLRKKPSGQLLQSAHAIDREFQVLKALGDHTDVPVPKVFCLCTDPSVIGT 851
              G  S+ RYV+RKKP G+LLQSAHA++REFQVL+ALG HT VPVPKVFCLC D SVIGT
Sbjct: 61   EGG--SLKRYVVRKKPPGKLLQSAHAVEREFQVLRALGLHTQVPVPKVFCLCIDTSVIGT 118

Query: 850  DFYIMEFLEGRIFLDPALPGVPPNRRRAIYLEMSKTLASLHSVNVDTIGLRNYGRRDNYC 671
             FYIME+LEGRIFLDP LPG+ PNRR AIY  ++K LA+LHS +VD+IGL  YG RD+YC
Sbjct: 119  AFYIMEYLEGRIFLDPKLPGITPNRRAAIYRAIAKALAALHSADVDSIGLEKYGHRDSYC 178

Query: 670  KRQVERWAKQYIASTGDGKPERNPKMLDLIQWLRQHVPFEDSSVTSGGLVHGDFRLDNLV 491
            KRQ+ERWAKQYIASTG+G+P  NPKM +LI WLRQH+P EDS   + GLVHGDFR+DNLV
Sbjct: 179  KRQIERWAKQYIASTGEGRPVGNPKMFELIDWLRQHIPLEDSRAVTTGLVHGDFRIDNLV 238

Query: 490  FHPIEDRVIGILDWELSTLGNQMCDVAYNCVSYVVDIRLDKLYSGFETRGTPEGIPPQAE 311
            FHPIEDRV+GILDWELSTLGNQMCDVA  C+ Y+ D+R D+L  GFE  G PEGIP Q+E
Sbjct: 239  FHPIEDRVVGILDWELSTLGNQMCDVANICLPYIKDLRPDRLDEGFEVTGIPEGIPSQSE 298

Query: 310  YLATYCSASAKPWPLANWKFYVAFSLFRGASIYAGVYHRWILGNASGGERAQNAERGANT 131
            YLA YCSA+ KPWP   WKFY+AF++FRGASI AGVY RWI+GNASGGERA++  R AN+
Sbjct: 299  YLAEYCSAAGKPWPGTAWKFYIAFNMFRGASILAGVYSRWIMGNASGGERAKHTGRVANS 358

Query: 130  LMDSAWLFINRRSVLPDQPP 71
            L+D+AW  I ++S+LP+ PP
Sbjct: 359  LIDTAWAVIEQKSLLPEHPP 378


>ref|NP_187337.2| acyl-CoA dehydrogenase [Arabidopsis thaliana]
            gi|20259431|gb|AAM14036.1| unknown protein [Arabidopsis
            thaliana] gi|26983892|gb|AAN86198.1| unknown protein
            [Arabidopsis thaliana] gi|332640940|gb|AEE74461.1|
            acyl-CoA dehydrogenase [Arabidopsis thaliana]
          Length = 824

 Score =  546 bits (1406), Expect = e-153
 Identities = 259/392 (66%), Positives = 314/392 (80%), Gaps = 2/392 (0%)
 Frame = -2

Query: 1210 MASKTSELVGVVKSAHEFNLDSLIQYAKANILGFPSSPSKINLSQFGHGQSNPTYLIEVV 1031
            M S T +LV  ++SAH F+ D+L ++A  N+ GFP++PS+  +SQFGHGQSNPT+LIEV 
Sbjct: 1    MGSSTGDLVTRIQSAHRFDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVG 60

Query: 1030 SSGGDSITRYVLRKKPSGQLLQSAHAIDREFQVLKALGDHTDVPVPKVFCLCTDPSVIGT 851
            S  G S+ RYVLRKKP G+LLQSAHA+DREFQVL+ALG+HT VPVPKVFCLCTDP+VIGT
Sbjct: 61   S--GSSLKRYVLRKKPPGKLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGT 118

Query: 850  DFYIMEFLEGRIFLDPALPGVPPNRRRAIYLEMSKTLASLHSVNVDTIGLRNYGRRDNYC 671
             FYIMEF+EGRIF+DP LP V P RR AIY   +K LASLHS +VD IGL  YGRR NYC
Sbjct: 119  AFYIMEFMEGRIFIDPKLPNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYC 178

Query: 670  KRQVERWAKQYIASTGDGKPERNPKMLDLIQWLRQHVPFEDSSVTSGGLVHGDFRLDNLV 491
            KRQ++RW KQY+AST +GKPERNPKM +L+ WLR+++P EDS+  + GLVHGDFR+DNLV
Sbjct: 179  KRQIDRWFKQYLASTSEGKPERNPKMFELVDWLRKNIPAEDSTGATSGLVHGDFRIDNLV 238

Query: 490  FHPIEDRVIGILDWELSTLGNQMCDVAYNCVSYVVDIRLDK--LYSGFETRGTPEGIPPQ 317
            FHP EDRVIGI+DWELSTLGNQMCDVAY+C+ Y+V+++LDK  +  GFET G PEG+   
Sbjct: 239  FHPSEDRVIGIIDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSEGFETTGLPEGMLSM 298

Query: 316  AEYLATYCSASAKPWPLANWKFYVAFSLFRGASIYAGVYHRWILGNASGGERAQNAERGA 137
             E+L  YCSAS KPWP ANWKFYVAFSLFR ASIY GVY RW++GNAS GERA+N    A
Sbjct: 299  PEFLLEYCSASGKPWPAANWKFYVAFSLFRAASIYTGVYSRWLMGNASAGERARNTGVQA 358

Query: 136  NTLMDSAWLFINRRSVLPDQPPIVDDSVAGAY 41
            N L++SA  +I R +VLP+ PP V   V+ +Y
Sbjct: 359  NELVESALGYIARENVLPEHPPSVQRDVSPSY 390


>dbj|BAF01758.1| putative acetyl-coA dehydrogenase [Arabidopsis thaliana]
          Length = 824

 Score =  546 bits (1406), Expect = e-153
 Identities = 259/392 (66%), Positives = 314/392 (80%), Gaps = 2/392 (0%)
 Frame = -2

Query: 1210 MASKTSELVGVVKSAHEFNLDSLIQYAKANILGFPSSPSKINLSQFGHGQSNPTYLIEVV 1031
            M S T +LV  ++SAH F+ D+L ++A  N+ GFP++PS+  +SQFGHGQSNPT+LIEV 
Sbjct: 1    MGSSTGDLVTRIQSAHRFDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVG 60

Query: 1030 SSGGDSITRYVLRKKPSGQLLQSAHAIDREFQVLKALGDHTDVPVPKVFCLCTDPSVIGT 851
            S  G S+ RYVLRKKP G+LLQSAHA+DREFQVL+ALG+HT VPVPKVFCLCTDP+VIGT
Sbjct: 61   S--GSSLKRYVLRKKPPGKLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGT 118

Query: 850  DFYIMEFLEGRIFLDPALPGVPPNRRRAIYLEMSKTLASLHSVNVDTIGLRNYGRRDNYC 671
             FYIMEF+EGRIF+DP LP V P RR AIY   +K LASLHS +VD IGL  YGRR NYC
Sbjct: 119  AFYIMEFMEGRIFIDPKLPNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYC 178

Query: 670  KRQVERWAKQYIASTGDGKPERNPKMLDLIQWLRQHVPFEDSSVTSGGLVHGDFRLDNLV 491
            KRQ++RW KQY+AST +GKPERNPKM +L+ WLR+++P EDS+  + GLVHGDFR+DNLV
Sbjct: 179  KRQIDRWFKQYLASTSEGKPERNPKMFELVDWLRKNIPAEDSTGATSGLVHGDFRIDNLV 238

Query: 490  FHPIEDRVIGILDWELSTLGNQMCDVAYNCVSYVVDIRLDK--LYSGFETRGTPEGIPPQ 317
            FHP EDRVIGI+DWELSTLGNQMCDVAY+C+ Y+V+++LDK  +  GFET G PEG+   
Sbjct: 239  FHPSEDRVIGIIDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSEGFETTGLPEGMLSM 298

Query: 316  AEYLATYCSASAKPWPLANWKFYVAFSLFRGASIYAGVYHRWILGNASGGERAQNAERGA 137
             E+L  YCSAS KPWP ANWKFYVAFSLFR ASIY GVY RW++GNAS GERA+N    A
Sbjct: 299  PEFLLEYCSASGKPWPAANWKFYVAFSLFRAASIYTGVYSRWLMGNASAGERARNTGVQA 358

Query: 136  NTLMDSAWLFINRRSVLPDQPPIVDDSVAGAY 41
            N L++SA  +I R +VLP+ PP V   V+ +Y
Sbjct: 359  NELVESALGYIARENVLPEHPPSVQRDVSPSY 390


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