BLASTX nr result

ID: Coptis23_contig00020039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020039
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283009.1| PREDICTED: uncharacterized protein LOC100243...   118   6e-25
emb|CBI16420.3| unnamed protein product [Vitis vinifera]              105   7e-21
ref|XP_002873587.1| hypothetical protein ARALYDRAFT_325778 [Arab...    98   1e-18
ref|XP_002297792.1| predicted protein [Populus trichocarpa] gi|2...    98   1e-18
ref|XP_002513454.1| conserved hypothetical protein [Ricinus comm...    96   3e-18

>ref|XP_002283009.1| PREDICTED: uncharacterized protein LOC100243206 [Vitis vinifera]
          Length = 462

 Score =  118 bits (296), Expect = 6e-25
 Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
 Frame = -2

Query: 580 IYAVGSTFDNGIHLLDFYPVPTSVCHVDFNEEMQEIS---TEITQNRFVPLSETVTACAS 410
           IYAVGS+ DNGIHLLDFYP  +S CHV+++E+MQ +S    +  QN FVPLSE VTACA+
Sbjct: 364 IYAVGSSSDNGIHLLDFYPDSSSPCHVEYSEDMQSLSGVKNQCKQNMFVPLSEGVTACAT 423

Query: 409 HPLNGTIIAGTKTSSMLVISQKSCSENGD 323
           HPLNGTIIAGTK SS+LVISQ+  S  GD
Sbjct: 424 HPLNGTIIAGTKQSSLLVISQRHKSCQGD 452


>emb|CBI16420.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score =  105 bits (261), Expect = 7e-21
 Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 3/78 (3%)
 Frame = -2

Query: 580 IYAVGSTFDNGIHLLDFYPVPTSVCHVDFNEEMQEIS---TEITQNRFVPLSETVTACAS 410
           IYAVGS+ DNGIHLLDFYP  +S CHV+++E+MQ +S    +  QN FVPLSE VTACA+
Sbjct: 440 IYAVGSSSDNGIHLLDFYPDSSSPCHVEYSEDMQSLSGVKNQCKQNMFVPLSEGVTACAT 499

Query: 409 HPLNGTIIAGTKTSSMLV 356
           HPLNGTIIAGTK  + L+
Sbjct: 500 HPLNGTIIAGTKVCTFLL 517


>ref|XP_002873587.1| hypothetical protein ARALYDRAFT_325778 [Arabidopsis lyrata subsp.
           lyrata] gi|297319424|gb|EFH49846.1| hypothetical protein
           ARALYDRAFT_325778 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = -2

Query: 580 IYAVGSTFDNGIHLLDFYPVPTSVCHVDFNEEMQEISTEIT---QNRFVPLSETVTACAS 410
           IY VGS  + GIH+LDF+P   S CHVD++E+ Q           N+FV LSETVT CA+
Sbjct: 395 IYVVGSMSEKGIHVLDFHPSSRSPCHVDYDEDTQRNEKRDRCNHSNKFVSLSETVTGCAA 454

Query: 409 HPLNGTIIAGTKTSSMLVISQKSCSENGD 323
           HPLNG I+AGT+ SS+LVI+Q+ CS + +
Sbjct: 455 HPLNGMIVAGTQNSSLLVIAQRHCSSSSE 483


>ref|XP_002297792.1| predicted protein [Populus trichocarpa] gi|222845050|gb|EEE82597.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
 Frame = -2

Query: 580 IYAVGSTFDNGIHLLDFYPVPTSVCHVDFN-----EEMQEISTEITQNRFVPLSETVTAC 416
           IY VGS+ DNGIHLLDFYP P+S CHVD++     E    ++    QNRF+PLSE VTAC
Sbjct: 346 IYVVGSSTDNGIHLLDFYPDPSSPCHVDYSPIEDAERPSRVNRRNKQNRFIPLSEGVTAC 405

Query: 415 ASHPLNGTIIAGTK 374
           A+HPLNGTIIAGT+
Sbjct: 406 AAHPLNGTIIAGTQ 419


>ref|XP_002513454.1| conserved hypothetical protein [Ricinus communis]
           gi|223547362|gb|EEF48857.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 486

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 46/72 (63%), Positives = 58/72 (80%), Gaps = 3/72 (4%)
 Frame = -2

Query: 580 IYAVGSTFDNGIHLLDFYPVPTSVCHVDFNEEMQEIST---EITQNRFVPLSETVTACAS 410
           IYAVGS+  NGIHLLDFYP P+S CHVD++ +++  S+   +  QN+FVPLSE VTACA+
Sbjct: 385 IYAVGSSSANGIHLLDFYPDPSSPCHVDYSMDIERHSSANNQEKQNKFVPLSEAVTACAA 444

Query: 409 HPLNGTIIAGTK 374
           HP+NG IIAGTK
Sbjct: 445 HPINGAIIAGTK 456


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