BLASTX nr result

ID: Coptis23_contig00020027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020027
         (1520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249...   371   e-100
emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]   357   6e-96
emb|CBI30260.3| unnamed protein product [Vitis vinifera]              349   1e-93
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...   335   2e-89
ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|A...   316   1e-83

>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
          Length = 394

 Score =  371 bits (953), Expect = e-100
 Identities = 217/391 (55%), Positives = 253/391 (64%), Gaps = 19/391 (4%)
 Frame = +2

Query: 161  MKQWRNQLHESEEQQPSAKIPRLLLLEPTHQPSPVASALPLFVPEPNSRIITSLSAFSDA 340
            +KQWRNQ HESEE  PS K+PRLLL        P  SALPLFVPEPNS+I ++LSAF D+
Sbjct: 5    LKQWRNQ-HESEEA-PSGKMPRLLL-----DQQPSGSALPLFVPEPNSKI-SNLSAFPDS 56

Query: 341  TTS--RFSGMG-CLFSXXXXXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPAAAAC 511
            TT+  RFS  G   FS            IF++M+AGA VP ELLQ IKKSLLN P     
Sbjct: 57   TTTATRFSKTGGSYFSLAQWQELELQALIFRHMLAGAAVPPELLQLIKKSLLNHPPYYL- 115

Query: 512  XXXXXXXXXXXXXTMLQSGYWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCERHVHR 691
                          +LQSGYWGR ++DPEPGRCRRTDGKKWRCSR++V G KYCERH+HR
Sbjct: 116  -QHPLQHYQHYQPALLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHR 174

Query: 692  GRNRSRKLVETPTPAATKGD-----------LKTPITVAALPITALASGNQFATSGPSTS 838
            GRNRSRK VE PTPAA  G              T   +AA P+T +A G  FA SGP  S
Sbjct: 175  GRNRSRKPVEIPTPAAAGGGGGAAVASVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPS 234

Query: 839  ANLTQLNQSRASENKTGNGGLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSD----G 1006
             +L  LN+S   E KT N GL E +   +S +GRSDG++LR FFDDWPRS Q+ D    G
Sbjct: 235  IDLLHLNRS-PPEPKTENKGLFEHRTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANG 293

Query: 1007 VGRNGGPSTTCLSISTPG-GSSDFSLKLSTGNGDEPEYQDGNGREERPQLDWGTGWNAHQ 1183
               +   S+T LS+S  G  SSD SLKLSTGNGDE   QD N   ERPQL+W  GW  HQ
Sbjct: 294  SNNSQATSSTYLSMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQ 353

Query: 1184 VSSMGGPLAEALRSSTSNASPTSVLYELRRG 1276
             + MGGPLAEALRS+TSN+SPTSVL++L RG
Sbjct: 354  SAQMGGPLAEALRSATSNSSPTSVLHQLPRG 384


>emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]
          Length = 437

 Score =  357 bits (915), Expect = 6e-96
 Identities = 221/439 (50%), Positives = 256/439 (58%), Gaps = 60/439 (13%)
 Frame = +2

Query: 140  LSMDCDLMKQWRNQLHESEEQQPSAKIPRLLLLEPTHQPSPVASALPLFVPEPNSRIITS 319
            +SMD  L KQWRNQ HESEE  PS K+PRLLL        P  SALPLFVPEPNS+I ++
Sbjct: 1    MSMDFHL-KQWRNQ-HESEEA-PSGKMPRLLL-----DQQPSGSALPLFVPEPNSKI-SN 51

Query: 320  LSAFSDATTS--RFSGM------------------------------------------G 367
            LSAF D+TT+  RFS                                            G
Sbjct: 52   LSAFPDSTTTATRFSKQLRKLGSRYGKVSGFLVSRFASNLPFFFSLFVWWCAFGLLETGG 111

Query: 368  CLFSXXXXXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPAAAACXXXXXXXXXXXX 547
              FS            IF++M+AGA VP ELLQ IKKSLLN P                 
Sbjct: 112  SYFSLAQWQELELQALIFRHMLAGAAVPPELLQLIKKSLLNHPPYYL--QHPLQHYQHYQ 169

Query: 548  XTMLQSGYWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCERHVHRGRNRSRKLVETP 727
              +LQSGYWGR ++DPEPGRCRRTDGKKWRCSR++V G KYCERH+HRGRNRSRK VE P
Sbjct: 170  PALLQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHRGRNRSRKPVEIP 229

Query: 728  TPAATKGD-----------LKTPITVAALPITALASGNQFATSGPSTSANLTQLNQSRAS 874
            TPAA  G              T   +AA P+T +A G  FA SGP  S +L  LN+S   
Sbjct: 230  TPAAAGGGGGAAVXSVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDLLHLNRS-PP 288

Query: 875  ENKTGNGGLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSD----GVGRNGGPSTTCL 1042
            E KT N GL E     +S +GRSDG++LR FFDDWPRS Q+ D    G   +   S+T L
Sbjct: 289  EPKTENKGLFEHXTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYL 348

Query: 1043 SISTPG-GSSDFSLKLSTGNGDEPEYQDGNGREERPQLDWGTGWNAHQVSSMGGPLAEAL 1219
            S+S  G  SSD SLKLSTGNGDE   QD N   ERPQL+W  GW  HQ + MGGPLAEAL
Sbjct: 349  SMSILGHHSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEAL 408

Query: 1220 RSSTSNASPTSVLYELRRG 1276
            RS+TSN+SPTSVL++L RG
Sbjct: 409  RSATSNSSPTSVLHQLPRG 427


>emb|CBI30260.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  349 bits (896), Expect = 1e-93
 Identities = 203/372 (54%), Positives = 238/372 (63%), Gaps = 19/372 (5%)
 Frame = +2

Query: 218  IPRLLLLEPTHQPSPVASALPLFVPEPNSRIITSLSAFSDATTS--RFSGMG-CLFSXXX 388
            +PRLLL        P  SALPLFVPEPNS+I ++LSAF D+TT+  RFS  G   FS   
Sbjct: 1    MPRLLL-----DQQPSGSALPLFVPEPNSKI-SNLSAFPDSTTTATRFSKTGGSYFSLAQ 54

Query: 389  XXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPAAAACXXXXXXXXXXXXXTMLQSG 568
                     IF++M+AGA VP ELLQ IKKSLLN P                   +LQSG
Sbjct: 55   WQELELQALIFRHMLAGAAVPPELLQLIKKSLLNHPPYYL--QHPLQHYQHYQPALLQSG 112

Query: 569  YWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCERHVHRGRNRSRKLVETPTPAATKG 748
            YWGR ++DPEPGRCRRTDGKKWRCSR++V G KYCERH+HRGRNRSRK VE PTPAA  G
Sbjct: 113  YWGRAAMDPEPGRCRRTDGKKWRCSRDVVTGQKYCERHMHRGRNRSRKPVEIPTPAAAGG 172

Query: 749  D-----------LKTPITVAALPITALASGNQFATSGPSTSANLTQLNQSRASENKTGNG 895
                          T   +AA P+T +A G  FA SGP  S +L  LN+S   E KT N 
Sbjct: 173  GGGAAVASVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDLLHLNRS-PPEPKTENK 231

Query: 896  GLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSD----GVGRNGGPSTTCLSISTPG- 1060
            GL E +   +S +GRSDG++LR FFDDWPRS Q+ D    G   +   S+T LS+S  G 
Sbjct: 232  GLFEHRTENVSGDGRSDGRVLRHFFDDWPRSIQEPDNAANGSNNSQATSSTYLSMSILGH 291

Query: 1061 GSSDFSLKLSTGNGDEPEYQDGNGREERPQLDWGTGWNAHQVSSMGGPLAEALRSSTSNA 1240
             SSD SLKLSTGNGDE   QD N   ERPQL+W  GW  HQ + MGGPLAEALRS+TSN+
Sbjct: 292  HSSDVSLKLSTGNGDEQSPQDVNAERERPQLNWAAGWGTHQSAQMGGPLAEALRSATSNS 351

Query: 1241 SPTSVLYELRRG 1276
            SPTSVL++L RG
Sbjct: 352  SPTSVLHQLPRG 363


>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
            gi|223525833|gb|EEF28270.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 428

 Score =  335 bits (859), Expect = 2e-89
 Identities = 205/421 (48%), Positives = 253/421 (60%), Gaps = 49/421 (11%)
 Frame = +2

Query: 161  MKQWRNQLHESEEQ--QPSAKIPRLLLLEPTHQPSP-----------VASALPLFVPEPN 301
            +KQWRNQ HESEE+  QPS K+P+LLL +P H+P              A+ LPLFVPEP+
Sbjct: 5    LKQWRNQQHESEEEEEQPSEKMPKLLL-DPPHEPQQQEQQHYPISGSTAAPLPLFVPEPH 63

Query: 302  SRIITS-LSAFSDATTS-----RFSGMGC--LFSXXXXXXXXXXXXIFKYMIAGAPVPAE 457
            S    S LSAF D++T+     RF  MG    FS            I++YM+AGA +P E
Sbjct: 64   SNNKNSNLSAFLDSSTAPPATARFPRMGGSGYFSLAQWQELELQALIYRYMLAGAAIPPE 123

Query: 458  LLQPIKKSLLNTPAAAACXXXXXXXXXXXXXTMLQSGYWGRNSVDPEPGRCRRTDGKKWR 637
            LLQPIKKSLL++P                   +LQ+GYWGR ++DPEPGRCRRTDGKKWR
Sbjct: 124  LLQPIKKSLLHSPPYFL--HHPLQHYSYYQPALLQTGYWGRAAMDPEPGRCRRTDGKKWR 181

Query: 638  CSREIVPGHKYCERHVHRGRNRSRKLVETPTPAATKG----------------------- 748
            CSR++V G KYCERHVHRGRNRSRK VE PT  ++                         
Sbjct: 182  CSRDVVAGQKYCERHVHRGRNRSRKPVEIPTTNSSTSTNTNSTGIGGGGGGGSAGGAISA 241

Query: 749  --DLKTPITVAALPITALASGNQFATSGPSTSANLTQLNQSRASENKTGNGGLLEIQNGR 922
                 +P  VA L ++ +ASG   + SG S S  L  LN +R+S+ K    GLL      
Sbjct: 242  AFSSSSPAIVAPL-LSGVASGTSLSFSGHSPSNELLHLN-NRSSDPKAEIKGLLLGPQNE 299

Query: 923  LSDEGRSDGQLLRQFFDDWPRSNQDSDGVGRNGGP--STTCLSISTPG-GSSDFSLKLST 1093
            +++  RSDG +LR FFDDWPRS Q+ D    N  P  S TCLSIS  G  SSD SLKLST
Sbjct: 300  VAN--RSDGHILRHFFDDWPRSLQEPDNTASNASPMNSATCLSISMSGNSSSDVSLKLST 357

Query: 1094 GNGDEPEYQDGNGREERPQLDWGTGWNAHQVSSMGGPLAEALRSSTSNASPTSVLYELRR 1273
            GNG+EP    G+ RE  PQ++W  GW  +Q+S MGGPLAEALRSSTSN+SPTSVL++L +
Sbjct: 358  GNGEEPAGSRGSEREHHPQVNWTGGWGTNQMSPMGGPLAEALRSSTSNSSPTSVLHQLPQ 417

Query: 1274 G 1276
            G
Sbjct: 418  G 418


>ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|AES81987.1| GRL3 [Medicago
            truncatula]
          Length = 384

 Score =  316 bits (809), Expect = 1e-83
 Identities = 189/393 (48%), Positives = 243/393 (61%), Gaps = 23/393 (5%)
 Frame = +2

Query: 164  KQWRNQLHESEEQQPSAKIPRLL------LLEPTHQPSPVASALPLFVPEPNSRIITSLS 325
            KQWRNQ HESE+Q  S K+P+LL          +HQ SP   ALPLF+P+PN+++ T+LS
Sbjct: 6    KQWRNQQHESEKQH-STKMPKLLHPAQSQSQSHSHQQSP---ALPLFLPQPNTKV-TNLS 60

Query: 326  AFSDATTSRFS--GMGCLFSXXXXXXXXXXXXIFKYMIAGAPVPAELLQPIKKSLLNTPA 499
              +  + +RF   GMG  FS            IF+YM+ GA VP ELLQPIKKSLL++  
Sbjct: 61   DSALPSNNRFPRIGMGSHFSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSLLHSSP 120

Query: 500  AAACXXXXXXXXXXXXXTMLQSGYWGRNSVDPEPGRCRRTDGKKWRCSREIVPGHKYCER 679
                              +LQSGYWGR ++DPEPGRCRRTDGKKWRC+R++V G KYCER
Sbjct: 121  --------YFLHHYQPTALLQSGYWGRGAMDPEPGRCRRTDGKKWRCARDVVAGQKYCER 172

Query: 680  HVHRGRNRSRKLVETPTPAATKGDLKTPI-TVAALPITALASGNQFATSGPSTSANLTQL 856
            H+HRGRNRSRK VE PTP +  G   + + ++++ P+   +  + F       S   T++
Sbjct: 173  HMHRGRNRSRKPVELPTPTSNGGGSFSALSSISSQPLVTSSFKSPFDLHFTERSTG-TKI 231

Query: 857  NQSRASENKTGNGGLLEIQNGRLSDEGRSDGQLLRQFFDDWPRSNQDSDGVGRNGGPSTT 1036
             +    E+    GG           +GR  GQ+LR FFDDWPRS QDSD    NGG S+T
Sbjct: 232  EEKSLCESDDHVGG-----------DGRPGGQMLRHFFDDWPRSLQDSDNAENNGGSSST 280

Query: 1037 CLSISTPG------GSSDFSLKLSTGNGDEPEYQDGN-------GREERPQLDWGTGWNA 1177
            CLSIS PG       SSD SLKLSTG G+EP  ++ N        ++++ QL+W  GWN+
Sbjct: 281  CLSISMPGNNNTSSSSSDVSLKLSTGYGEEPCPRNENVGLVQTEQQQQQLQLNWIGGWNS 340

Query: 1178 -HQVSSMGGPLAEALRSSTSNASPTSVLYELRR 1273
             +QVSSMGGPLAEALRSSTS +SPTSVL++L R
Sbjct: 341  GNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPR 373


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