BLASTX nr result

ID: Coptis23_contig00020017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020017
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864906.1| predicted protein [Arabidopsis lyrata subsp....    74   1e-11
ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|NP_201256.2| uncharacterized protein [Arabidopsis thaliana] ...    73   2e-11
ref|NP_001044361.1| Os01g0767600 [Oryza sativa Japonica Group] g...    73   3e-11
gb|EAZ13668.1| hypothetical protein OsJ_03587 [Oryza sativa Japo...    73   3e-11

>ref|XP_002864906.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310741|gb|EFH41165.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -1

Query: 133 KPISDLKEAIVKGLGFGIEDVKISGFDIRDALVGRSVAYEFDIE 2
           K ISDLKEAIVKGLGF  E+VK+SGFD+RDALVG SV+YEFD+E
Sbjct: 39  KAISDLKEAIVKGLGFQSEEVKVSGFDVRDALVGHSVSYEFDLE 82


>ref|XP_002313946.1| predicted protein [Populus trichocarpa] gi|222850354|gb|EEE87901.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = -1

Query: 151 NALTNSKPISDLKEAIVKGLGFGIEDVKISGFDIRDALVGRSVAYEFDIE 2
           N+  + K ISDLKEAIVKGLGF  ++ KISGFD+RDALVG SVAYEFD+E
Sbjct: 33  NSPPHPKAISDLKEAIVKGLGFQADEFKISGFDLRDALVGHSVAYEFDVE 82


>ref|NP_201256.2| uncharacterized protein [Arabidopsis thaliana]
           gi|28393303|gb|AAO42078.1| unknown protein [Arabidopsis
           thaliana] gi|28827700|gb|AAO50694.1| unknown protein
           [Arabidopsis thaliana] gi|332010526|gb|AED97909.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 424

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -1

Query: 133 KPISDLKEAIVKGLGFGIEDVKISGFDIRDALVGRSVAYEFDIE 2
           K ISDLKE+IVKGLGF  E+VK+SGFDIRDALVG SV+YEFD+E
Sbjct: 38  KAISDLKESIVKGLGFQSEEVKVSGFDIRDALVGHSVSYEFDLE 81


>ref|NP_001044361.1| Os01g0767600 [Oryza sativa Japonica Group]
           gi|22535590|dbj|BAC10765.1| unknown protein [Oryza
           sativa Japonica Group] gi|53793556|dbj|BAD53326.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113533892|dbj|BAF06275.1| Os01g0767600 [Oryza sativa
           Japonica Group] gi|215697895|dbj|BAG92088.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 422

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = -1

Query: 133 KPISDLKEAIVKGLGFGIEDVKISGFDIRDALVGRSVAYEFDIE 2
           K ISDL+EAIVKGLGF  E++K+SGFD+RDALVG++VAYEFDIE
Sbjct: 42  KAISDLREAIVKGLGFQSEELKVSGFDVRDALVGQAVAYEFDIE 85


>gb|EAZ13668.1| hypothetical protein OsJ_03587 [Oryza sativa Japonica Group]
          Length = 452

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = -1

Query: 133 KPISDLKEAIVKGLGFGIEDVKISGFDIRDALVGRSVAYEFDIE 2
           K ISDL+EAIVKGLGF  E++K+SGFD+RDALVG++VAYEFDIE
Sbjct: 42  KAISDLREAIVKGLGFQSEELKVSGFDVRDALVGQAVAYEFDIE 85


Top