BLASTX nr result

ID: Coptis23_contig00020013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020013
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...    90   2e-16
ref|XP_003553154.1| PREDICTED: uncharacterized protein LOC100790...    85   7e-15
ref|XP_003538352.1| PREDICTED: uncharacterized protein LOC100781...    85   7e-15
ref|XP_004171923.1| PREDICTED: protein TIC 40, chloroplastic-lik...    82   4e-14
ref|XP_004148914.1| PREDICTED: protein TIC 40, chloroplastic-lik...    82   4e-14

>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
           gi|296089465|emb|CBI39284.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -3

Query: 142 STIGSPLFWIGIGVGLSALFSWVATNLKKYAMQQAFKTMMGQMPSEN 2
           S IGSPLFWIG+GVGLSALFSWVA+NLKKYAMQQAFKT+MGQM S+N
Sbjct: 95  SNIGSPLFWIGVGVGLSALFSWVASNLKKYAMQQAFKTLMGQMDSQN 141


>ref|XP_003553154.1| PREDICTED: uncharacterized protein LOC100790904 [Glycine max]
          Length = 432

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 STIGSPLFWIGIGVGLSALFSWVATNLKKYAMQQAFKTMMGQMPSEN 2
           STIGSPLFWIG+GVGLSALFS VA+ LKKYAMQQAFKTMMGQM S+N
Sbjct: 98  STIGSPLFWIGVGVGLSALFSVVASRLKKYAMQQAFKTMMGQMNSQN 144


>ref|XP_003538352.1| PREDICTED: uncharacterized protein LOC100781154 [Glycine max]
          Length = 429

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = -3

Query: 142 STIGSPLFWIGIGVGLSALFSWVATNLKKYAMQQAFKTMMGQMPSEN 2
           STIGSPLFWIG+GVGLSALFS VA+ LKKYAMQQAFKTMMGQM S+N
Sbjct: 95  STIGSPLFWIGVGVGLSALFSVVASRLKKYAMQQAFKTMMGQMNSQN 141


>ref|XP_004171923.1| PREDICTED: protein TIC 40, chloroplastic-like, partial [Cucumis
           sativus]
          Length = 304

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -3

Query: 142 STIGSPLFWIGIGVGLSALFSWVATNLKKYAMQQAFKTMMGQMPSEN 2
           S +GSPLFW+G+GVGLSALF+WVA+ LKKYAMQQAFKTMM QM S+N
Sbjct: 97  SYVGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQN 143


>ref|XP_004148914.1| PREDICTED: protein TIC 40, chloroplastic-like [Cucumis sativus]
          Length = 419

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = -3

Query: 142 STIGSPLFWIGIGVGLSALFSWVATNLKKYAMQQAFKTMMGQMPSEN 2
           S +GSPLFW+G+GVGLSALF+WVA+ LKKYAMQQAFKTMM QM S+N
Sbjct: 97  SYVGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQN 143


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