BLASTX nr result

ID: Coptis23_contig00020009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00020009
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   164   5e-39
emb|CAN81408.1| hypothetical protein VITISV_010447 [Vitis vinifera]   164   5e-39
ref|XP_002530572.1| DNA polymerase I, putative [Ricinus communis...   152   3e-35
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   151   6e-35
ref|XP_002330658.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
           gi|296084279|emb|CBI24667.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/97 (83%), Positives = 89/97 (91%)
 Frame = +1

Query: 1   FGTVENLLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKP 180
           FGT+ENLLQCVDQV+EERIRKALI+ ADQA+LSKNLA+LR DLPFYMVPFTT DL+F KP
Sbjct: 342 FGTLENLLQCVDQVQEERIRKALISGADQAVLSKNLALLRCDLPFYMVPFTTEDLIFTKP 401

Query: 181 EDDGEKFTSLLRAISAYAEGYSADRIIRRASTLWKKL 291
           ED+GEKFTSLL AISAYAEG+SAD IIRRA  LWKKL
Sbjct: 402 EDNGEKFTSLLNAISAYAEGFSADPIIRRAFYLWKKL 438


>emb|CAN81408.1| hypothetical protein VITISV_010447 [Vitis vinifera]
          Length = 734

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/97 (83%), Positives = 89/97 (91%)
 Frame = +1

Query: 1   FGTVENLLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKP 180
           FGT+ENLLQCVDQV+EERIRKALI+ ADQA+LSKNLA+LR DLPFYMVPFTT DL+F KP
Sbjct: 635 FGTLENLLQCVDQVQEERIRKALISGADQAVLSKNLALLRCDLPFYMVPFTTEDLIFTKP 694

Query: 181 EDDGEKFTSLLRAISAYAEGYSADRIIRRASTLWKKL 291
           ED+GEKFTSLL AISAYAEG+SAD IIRRA  LWKKL
Sbjct: 695 EDNGEKFTSLLNAISAYAEGFSADPIIRRAFYLWKKL 731


>ref|XP_002530572.1| DNA polymerase I, putative [Ricinus communis]
           gi|223529871|gb|EEF31802.1| DNA polymerase I, putative
           [Ricinus communis]
          Length = 246

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/97 (76%), Positives = 86/97 (88%)
 Frame = +1

Query: 1   FGTVENLLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKP 180
           FGT+ENLL+CVD+VE +RIR+AL ANADQA+LSKNLA+LRSDLPFYMVPF+T D  F+KP
Sbjct: 147 FGTLENLLECVDKVEGQRIREALKANADQAVLSKNLALLRSDLPFYMVPFSTKDFTFEKP 206

Query: 181 EDDGEKFTSLLRAISAYAEGYSADRIIRRASTLWKKL 291
           EDDGEKF +LL AIS YA+G+SAD IIRRA  LWKKL
Sbjct: 207 EDDGEKFMNLLNAISVYAKGFSADPIIRRALYLWKKL 243


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/97 (78%), Positives = 85/97 (87%)
 Frame = +1

Query: 1   FGTVENLLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKP 180
           FGT+ENLLQ VDQVE+ERI+K L+ NA+QAILSK+LA LRSDLPFYMVPFTT DL+FKKP
Sbjct: 362 FGTLENLLQHVDQVEDERIKKMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKP 421

Query: 181 EDDGEKFTSLLRAISAYAEGYSADRIIRRASTLWKKL 291
           ED+GEKFTSLL AI AYAE +SAD IIRR   LWKKL
Sbjct: 422 EDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKL 458


>ref|XP_002330658.1| predicted protein [Populus trichocarpa] gi|222872262|gb|EEF09393.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  146 bits (369), Expect = 1e-33
 Identities = 72/97 (74%), Positives = 84/97 (86%)
 Frame = +1

Query: 1   FGTVENLLQCVDQVEEERIRKALIANADQAILSKNLAMLRSDLPFYMVPFTTNDLVFKKP 180
           FGT+ENLL+CVDQVE E IRKAL  NA+QA+LSK LA LR +LP YMVPF T DL+FKKP
Sbjct: 211 FGTLENLLKCVDQVEGESIRKALRQNANQAVLSKELAKLRCELPEYMVPFATTDLIFKKP 270

Query: 181 EDDGEKFTSLLRAISAYAEGYSADRIIRRASTLWKKL 291
           ED+GEKFT+LL A+S+YAEG+SAD IIRRAS LW+KL
Sbjct: 271 EDNGEKFTNLLTAVSSYAEGFSADMIIRRASKLWEKL 307


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