BLASTX nr result

ID: Coptis23_contig00019989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019989
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]     120   9e-26
ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   115   5e-24
ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   112   2e-23
ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   111   5e-23
emb|CBI29991.3| unnamed protein product [Vitis vinifera]              110   1e-22

>gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
          Length = 925

 Score =  120 bits (302), Expect = 9e-26
 Identities = 65/112 (58%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = -3

Query: 335 LDCILSRITVLKVPPNVDLVAKKAAIPPCDFYYDMSYSLPYSTFSNIPSET-RVGSETSS 159
           LDCI+S+I +++V  N+DL AK+ +IPPCD YYDMSYSL YSTF N+P E+ R GSETSS
Sbjct: 262 LDCIVSKIRIVRVESNIDLKAKEDSIPPCDLYYDMSYSLSYSTFGNLPPESLRAGSETSS 321

Query: 158 ITCDGGSSGETSGTKFNSDKYFLGGHHEKSEMTLLDLYSGCGAMSTGLCLGA 3
                 +S    G K  SD        EK  ++LLDLYSGCGAMSTGLCLGA
Sbjct: 322 TISSEDASNVCKG-KCQSDSE-ASSSGEKRVLSLLDLYSGCGAMSTGLCLGA 371


>ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
          Length = 830

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/111 (50%), Positives = 74/111 (66%)
 Frame = -3

Query: 335 LDCILSRITVLKVPPNVDLVAKKAAIPPCDFYYDMSYSLPYSTFSNIPSETRVGSETSSI 156
           LDCI+S++ + K  P+VDL +KK  +P CD+YYDM Y++PY TFSNI +E+     +S+I
Sbjct: 169 LDCIVSKVKIYKKSPSVDLTSKKGKLPSCDYYYDMKYTVPYLTFSNIVNES---DASSTI 225

Query: 155 TCDGGSSGETSGTKFNSDKYFLGGHHEKSEMTLLDLYSGCGAMSTGLCLGA 3
           + + GS+G  S     + K         SE TLLDLYSGCGAMSTGLC GA
Sbjct: 226 SSESGSNGCVSNANLANGKTTQNNSSGSSEWTLLDLYSGCGAMSTGLCFGA 276


>ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
          Length = 834

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/111 (48%), Positives = 72/111 (64%)
 Frame = -3

Query: 335 LDCILSRITVLKVPPNVDLVAKKAAIPPCDFYYDMSYSLPYSTFSNIPSETRVGSETSSI 156
           LDCI+S++ + K  P+VDL +KKA +P CD+YYDM Y++PY TFSN+ +       +S+I
Sbjct: 171 LDCIVSKVKIFKKNPSVDLASKKAKLPFCDYYYDMKYTVPYLTFSNLVNGKNDSDASSTI 230

Query: 155 TCDGGSSGETSGTKFNSDKYFLGGHHEKSEMTLLDLYSGCGAMSTGLCLGA 3
           + + GS G  +       K         S+ TLLDLYSGCGAMSTGLCLGA
Sbjct: 231 SSESGSIGCVNNANLAKRKTTQNNSSGSSQWTLLDLYSGCGAMSTGLCLGA 281


>ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
           vinifera]
          Length = 956

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/113 (50%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = -3

Query: 335 LDCILSRITVLKVPPNVDLVAKKAAIPPCDFYYDMSYSLPYSTFSNIPSE-TRVGSET-S 162
           LDC++ ++ + +VP N+DL A+K AI  CD+YYDM Y L YS+F  +P E +RV SE  S
Sbjct: 295 LDCLVQKLNIARVPHNLDLEARKLAISSCDYYYDMLYLLDYSSFIKLPPENSRVNSEALS 354

Query: 161 SITCDGGSSGETSGTKFNSDKYFLGGHHEKSEMTLLDLYSGCGAMSTGLCLGA 3
           +I+ +    G T   K +S++         SEMTLLDLYSGCGAMS+GLCLGA
Sbjct: 355 TISSEANMDGSTCELKSDSEEVSQARERSLSEMTLLDLYSGCGAMSSGLCLGA 407


>emb|CBI29991.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/113 (50%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
 Frame = -3

Query: 335 LDCILSRITVLKVPPNVDLVAKKAAIPPCDFYYDMSYSLPYSTFSNIPSET--RVGSETS 162
           LDCI+S++ +++V PNVDL  K+  IPPCD YYDMSYSL + TF+N+ +E       E+S
Sbjct: 160 LDCIVSKVEIVQVAPNVDLAEKEKTIPPCDLYYDMSYSLKHLTFANLLTENSRTESDESS 219

Query: 161 SITCDGGSSGETSGTKFNSDKYFLGGHHEKSEMTLLDLYSGCGAMSTGLCLGA 3
           +I+ + G +  T G      +       + S MTLLDLYSGCGAMSTGLCLGA
Sbjct: 220 TISSEIGLNSTTDGINSAIGESSQVHKFQGSGMTLLDLYSGCGAMSTGLCLGA 272


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