BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019988
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520975.1| trytophan synthase alpha subunit, putative [...    54   2e-15
ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|2...    50   2e-14
emb|CAH56477.1| tryptophan synthase, alpha subunit (TSA1) [Isati...    51   3e-14
ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|2...    50   3e-14
gb|AAP82017.1| putative tryptophan synthase alpha chain, partial...    49   6e-14

>ref|XP_002520975.1| trytophan synthase alpha subunit, putative [Ricinus communis]
           gi|223539812|gb|EEF41392.1| trytophan synthase alpha
           subunit, putative [Ricinus communis]
          Length = 313

 Score = 54.3 bits (129), Expect(3) = 2e-15
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -3

Query: 220 NIEIVLLTTPTTPTERMKPIVEAAEGFV 137
           NIE+VLLTTPTTPTERMK IVEAAEGFV
Sbjct: 194 NIELVLLTTPTTPTERMKAIVEAAEGFV 221



 Score = 42.7 bits (99), Expect(3) = 2e-15
 Identities = 26/42 (61%), Positives = 26/42 (61%), Gaps = 14/42 (33%)
 Frame = -2

Query: 137 VSLVGVTGARASV--------------TTKPVAVGFGISKPE 54
           VS VGVTGARASV              T KPVAVGFGISKPE
Sbjct: 224 VSSVGVTGARASVSDRVQTLLQEIKEATAKPVAVGFGISKPE 265



 Score = 30.0 bits (66), Expect(3) = 2e-15
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -1

Query: 51  VQQIAGCGSDGVIVGSA 1
           V+Q+AG G+DGVIVGSA
Sbjct: 267 VKQVAGWGADGVIVGSA 283


>ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|222857072|gb|EEE94619.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 50.1 bits (118), Expect(3) = 2e-14
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -3

Query: 217 IEIVLLTTPTTPTERMKPIVEAAEGFV 137
           +E+VLLTTPTTPTERMK IVEAA+GFV
Sbjct: 192 LELVLLTTPTTPTERMKAIVEAADGFV 218



 Score = 43.1 bits (100), Expect(3) = 2e-14
 Identities = 26/42 (61%), Positives = 26/42 (61%), Gaps = 14/42 (33%)
 Frame = -2

Query: 137 VSLVGVTGARASV--------------TTKPVAVGFGISKPE 54
           VS VGVTG RASV              TTKPVAVGFGISKPE
Sbjct: 221 VSSVGVTGTRASVSDRVQTLLQDIKETTTKPVAVGFGISKPE 262



 Score = 30.0 bits (66), Expect(3) = 2e-14
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -1

Query: 51  VQQIAGCGSDGVIVGSA 1
           V+Q+AG G+DGVIVGSA
Sbjct: 264 VKQVAGWGADGVIVGSA 280


>emb|CAH56477.1| tryptophan synthase, alpha subunit (TSA1) [Isatis tinctoria]
           gi|52673242|emb|CAH56478.1| tryptophan synthase, alpha
           subunit (TSA1) [Isatis tinctoria]
          Length = 311

 Score = 51.2 bits (121), Expect(3) = 3e-14
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 220 NIEIVLLTTPTTPTERMKPIVEAAEGFV 137
           NIE+VLLTTPTTPTERMK IV+A+EGF+
Sbjct: 192 NIELVLLTTPTTPTERMKRIVDASEGFI 219



 Score = 40.4 bits (93), Expect(3) = 3e-14
 Identities = 24/42 (57%), Positives = 26/42 (61%), Gaps = 14/42 (33%)
 Frame = -2

Query: 137 VSLVGVTGARASV--------------TTKPVAVGFGISKPE 54
           VS +GVTGARASV              T KPVAVGFGIS+PE
Sbjct: 222 VSSIGVTGARASVSGKVQSLLKDIKEATDKPVAVGFGISQPE 263



 Score = 30.8 bits (68), Expect(3) = 3e-14
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -1

Query: 63  ETREVQQIAGCGSDGVIVGSA 1
           +   V+QIAG G+DGVIVGSA
Sbjct: 261 QPEHVKQIAGWGADGVIVGSA 281


>ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|222842533|gb|EEE80080.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 50.1 bits (118), Expect(3) = 3e-14
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -3

Query: 217 IEIVLLTTPTTPTERMKPIVEAAEGFV 137
           +E+VLLTTPTTPTERMK IVEAA+GFV
Sbjct: 192 LELVLLTTPTTPTERMKAIVEAADGFV 218



 Score = 44.7 bits (104), Expect(3) = 3e-14
 Identities = 27/42 (64%), Positives = 27/42 (64%), Gaps = 14/42 (33%)
 Frame = -2

Query: 137 VSLVGVTGARASV--------------TTKPVAVGFGISKPE 54
           VS VGVTGARASV              TTKPVAVGFGISKPE
Sbjct: 221 VSSVGVTGARASVSDRVQTLLRDIKESTTKPVAVGFGISKPE 262



 Score = 27.7 bits (60), Expect(3) = 3e-14
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 51  VQQIAGCGSDGVIVGSA 1
           V+Q+A  G+DGVIVGSA
Sbjct: 264 VKQVAAWGADGVIVGSA 280


>gb|AAP82017.1| putative tryptophan synthase alpha chain, partial [Brassica
           oleracea var. capitata]
          Length = 226

 Score = 49.3 bits (116), Expect(3) = 6e-14
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = -3

Query: 220 NIEIVLLTTPTTPTERMKPIVEAAEGFV 137
           +IE+VLLTTPTTPTERMK IV+A+EGF+
Sbjct: 107 SIELVLLTTPTTPTERMKRIVDASEGFI 134



 Score = 42.0 bits (97), Expect(3) = 6e-14
 Identities = 25/42 (59%), Positives = 26/42 (61%), Gaps = 14/42 (33%)
 Frame = -2

Query: 137 VSLVGVTGARASV--------------TTKPVAVGFGISKPE 54
           VS +GVTGARASV              T KPVAVGFGISKPE
Sbjct: 137 VSSIGVTGARASVSGKVQSLLKDIKEATDKPVAVGFGISKPE 178



 Score = 30.4 bits (67), Expect(3) = 6e-14
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 51  VQQIAGCGSDGVIVGSA 1
           V+QIAG G+DGVIVGSA
Sbjct: 180 VKQIAGWGADGVIVGSA 196