BLASTX nr result

ID: Coptis23_contig00019984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019984
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28855.3| unnamed protein product [Vitis vinifera]              164   5e-39
ref|XP_002274227.1| PREDICTED: nitrate transporter 1.3-like [Vit...   164   5e-39
ref|XP_002525323.1| oligopeptide transporter, putative [Ricinus ...   161   6e-38
ref|XP_002269955.1| PREDICTED: nitrate transporter 1.3 [Vitis vi...   158   5e-37
ref|XP_004168273.1| PREDICTED: nitrate transporter 1.3-like, par...   152   3e-35

>emb|CBI28855.3| unnamed protein product [Vitis vinifera]
          Length = 1179

 Score =  164 bits (416), Expect = 5e-39
 Identities = 86/147 (58%), Positives = 97/147 (65%), Gaps = 3/147 (2%)
 Frame = +3

Query: 3    RRTVAVQQHIKISVFWLVPQFFLVGAGEAFAYVGQLEFFIREAPD*MKSMSTGLFLSTLS 182
            RR  AVQ    IS FWLVPQFFLVGAGEAFAYVGQLEFFIREAPD MKSMSTGLFLSTL+
Sbjct: 1022 RREAAVQHKTNISAFWLVPQFFLVGAGEAFAYVGQLEFFIREAPDRMKSMSTGLFLSTLA 1081

Query: 183  MGFFXXXXXXXXXDKVTKNSWIRNNLNKGKLENFYWXXXXXXXXXXXXXXXXATRHQYKV 362
            MGFF         DKVT   W+R+NLN+GKL+NFYW                A RHQYK 
Sbjct: 1082 MGFFVSSLLVSLVDKVTNMRWLRSNLNRGKLDNFYWMLAVLGVLNFLAFLVFAMRHQYKT 1141

Query: 363  EQYKTSN---KGEELKEWNDGRQADNE 434
             QYK+ +   + E  K WN+G  ++ E
Sbjct: 1142 LQYKSPDVYGENELKKGWNEGITSEME 1168


>ref|XP_002274227.1| PREDICTED: nitrate transporter 1.3-like [Vitis vinifera]
          Length = 594

 Score =  164 bits (416), Expect = 5e-39
 Identities = 86/147 (58%), Positives = 97/147 (65%), Gaps = 3/147 (2%)
 Frame = +3

Query: 3   RRTVAVQQHIKISVFWLVPQFFLVGAGEAFAYVGQLEFFIREAPD*MKSMSTGLFLSTLS 182
           RR  AVQ    IS FWLVPQFFLVGAGEAFAYVGQLEFFIREAPD MKSMSTGLFLSTL+
Sbjct: 437 RREAAVQHKTNISAFWLVPQFFLVGAGEAFAYVGQLEFFIREAPDRMKSMSTGLFLSTLA 496

Query: 183 MGFFXXXXXXXXXDKVTKNSWIRNNLNKGKLENFYWXXXXXXXXXXXXXXXXATRHQYKV 362
           MGFF         DKVT   W+R+NLN+GKL+NFYW                A RHQYK 
Sbjct: 497 MGFFVSSLLVSLVDKVTNMRWLRSNLNRGKLDNFYWMLAVLGVLNFLAFLVFAMRHQYKT 556

Query: 363 EQYKTSN---KGEELKEWNDGRQADNE 434
            QYK+ +   + E  K WN+G  ++ E
Sbjct: 557 LQYKSPDVYGENELKKGWNEGITSEME 583


>ref|XP_002525323.1| oligopeptide transporter, putative [Ricinus communis]
           gi|223535382|gb|EEF37056.1| oligopeptide transporter,
           putative [Ricinus communis]
          Length = 589

 Score =  161 bits (407), Expect = 6e-38
 Identities = 88/139 (63%), Positives = 96/139 (69%), Gaps = 2/139 (1%)
 Frame = +3

Query: 3   RRTVAVQQHIKISVFWLVPQFFLVGAGEAFAYVGQLEFFIREAPD*MKSMSTGLFLSTLS 182
           RR  AVQ   +IS FWLVPQ+FLVGAGEAFAYVGQLEFFIREAP+ MKSMSTGLFLSTLS
Sbjct: 438 RREFAVQYGTQISAFWLVPQYFLVGAGEAFAYVGQLEFFIREAPERMKSMSTGLFLSTLS 497

Query: 183 MGFFXXXXXXXXXDKVTKNSWIRNNLNKGKLENFYWXXXXXXXXXXXXXXXXATRHQYKV 362
           MGFF         DKVTK  W+R+NLNKG+L+NFYW                A RHQYKV
Sbjct: 498 MGFFVSSLLVSIVDKVTKKIWLRSNLNKGELDNFYWLLAALGSLNFFAFLAFAMRHQYKV 557

Query: 363 EQY-KTSNKGE-ELKEWND 413
            QY K  + GE ELK  ND
Sbjct: 558 LQYTKPFDSGEKELKTPND 576


>ref|XP_002269955.1| PREDICTED: nitrate transporter 1.3 [Vitis vinifera]
           gi|147844567|emb|CAN80060.1| hypothetical protein
           VITISV_007940 [Vitis vinifera]
          Length = 296

 Score =  158 bits (399), Expect = 5e-37
 Identities = 84/147 (57%), Positives = 95/147 (64%), Gaps = 3/147 (2%)
 Frame = +3

Query: 3   RRTVAVQQHIKISVFWLVPQFFLVGAGEAFAYVGQLEFFIREAPD*MKSMSTGLFLSTLS 182
           RR  AVQ   KIS FWLVPQFFLV AGEAFAYVGQLEFFIR+APD MKSMSTGLFLSTL+
Sbjct: 139 RREAAVQHKTKISAFWLVPQFFLVDAGEAFAYVGQLEFFIRKAPDRMKSMSTGLFLSTLA 198

Query: 183 MGFFXXXXXXXXXDKVTKNSWIRNNLNKGKLENFYWXXXXXXXXXXXXXXXXATRHQYKV 362
           MGFF         DKVT   W+R+NLN GKL+NFYW                A RHQY  
Sbjct: 199 MGFFVSSLLVSLVDKVTNMRWLRSNLNWGKLDNFYWMLAVLGVLNFLAFLVFAMRHQYMT 258

Query: 363 EQYKTSN---KGEELKEWNDGRQADNE 434
            QY +S+   + E  K WN+G  ++ E
Sbjct: 259 LQYNSSDVYGENELKKGWNEGITSEME 285


>ref|XP_004168273.1| PREDICTED: nitrate transporter 1.3-like, partial [Cucumis sativus]
          Length = 329

 Score =  152 bits (384), Expect = 3e-35
 Identities = 80/138 (57%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   RRTVAVQQHIKISVFWLVPQFFLVGAGEAFAYVGQLEFFIREAPD*MKSMSTGLFLSTLS 182
           R+  AV Q  +IS FWL+PQFFLVGAGEAF YVGQLEFFIREAP+ MKSMSTGLFLSTLS
Sbjct: 175 RKASAVGQSTRISAFWLIPQFFLVGAGEAFTYVGQLEFFIREAPEQMKSMSTGLFLSTLS 234

Query: 183 MGFFXXXXXXXXXDKVTKNSWIRNNLNKGKLENFYWXXXXXXXXXXXXXXXXATRHQYKV 362
           MGFF         DKVT   W+R+NLNKG L  FYW                A +HQYK 
Sbjct: 235 MGFFVSSLLVTIVDKVTNKQWLRSNLNKGHLSYFYWLLAVLGLLNFFFFILLARKHQYKD 294

Query: 363 EQYKTS-NKGEELKEWND 413
           + Y +S +  EELK  ND
Sbjct: 295 QHYVSSKDNNEELKISND 312


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