BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019973
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285679.1| PREDICTED: probable DNA primase large subuni...   308   8e-82
ref|XP_003630496.1| hypothetical protein MTR_8g097160 [Medicago ...   296   3e-78
ref|XP_002514889.1| DNA primase large subunit, putative [Ricinus...   296   4e-78
ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|2...   296   5e-78
ref|XP_003524908.1| PREDICTED: probable DNA primase large subuni...   294   2e-77

>ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
           gi|297741936|emb|CBI33371.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  308 bits (790), Expect = 8e-82
 Identities = 142/167 (85%), Positives = 149/167 (89%)
 Frame = +3

Query: 144 SFPLCMRHLFEKLKEDHHLKHGGRMQXXXXXXXXXXXXEDALAFWKAEFSHKVGAERFDK 323
           SFPLCMRHLFEKL+EDHHLKHGGRMQ            +DALAFWKAEFS KVG+ERFDK
Sbjct: 275 SFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQKVGSERFDK 334

Query: 324 EYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHFSEENLRAALSKMGVG 503
           EYAY IRHNYGKEGKRTDYTPYSCQKII STPG GDHHGCPYRHFSEENLRAAL KMGVG
Sbjct: 335 EYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGKMGVG 394

Query: 504 GRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQYFTDSQ 644
            R+MEDVM+KVRNRHYQLACTLTFEAVHG+SCDAGINHPNQYF+DSQ
Sbjct: 395 NRAMEDVMDKVRNRHYQLACTLTFEAVHGSSCDAGINHPNQYFSDSQ 441


>ref|XP_003630496.1| hypothetical protein MTR_8g097160 [Medicago truncatula]
           gi|355524518|gb|AET04972.1| hypothetical protein
           MTR_8g097160 [Medicago truncatula]
          Length = 453

 Score =  296 bits (759), Expect = 3e-78
 Identities = 134/167 (80%), Positives = 146/167 (87%)
 Frame = +3

Query: 144 SFPLCMRHLFEKLKEDHHLKHGGRMQXXXXXXXXXXXXEDALAFWKAEFSHKVGAERFDK 323
           SFPLCMRHLF+KLKEDHHLKHGGRMQ            +DALAFW+AEFS KVG E+F+K
Sbjct: 279 SFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEK 338

Query: 324 EYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHFSEENLRAALSKMGVG 503
           EY+Y IRHNYGKEGKRTDYTPYSC K+I STPGAGDHHGCPYRHFSEENLRAALS+MGV 
Sbjct: 339 EYSYNIRHNYGKEGKRTDYTPYSCSKVISSTPGAGDHHGCPYRHFSEENLRAALSRMGVN 398

Query: 504 GRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQYFTDSQ 644
            R+MEDVM+KVRNRHYQLACTLTFEA+HG  CDAGINHPNQYF+DSQ
Sbjct: 399 SRAMEDVMDKVRNRHYQLACTLTFEALHGVQCDAGINHPNQYFSDSQ 445


>ref|XP_002514889.1| DNA primase large subunit, putative [Ricinus communis]
           gi|223545940|gb|EEF47443.1| DNA primase large subunit,
           putative [Ricinus communis]
          Length = 444

 Score =  296 bits (758), Expect = 4e-78
 Identities = 135/167 (80%), Positives = 146/167 (87%)
 Frame = +3

Query: 144 SFPLCMRHLFEKLKEDHHLKHGGRMQXXXXXXXXXXXXEDALAFWKAEFSHKVGAERFDK 323
           SFPLCMRHLFEKL++DHHLKHGGRMQ            +DALAFWKAEFS KVGAERFDK
Sbjct: 270 SFPLCMRHLFEKLRDDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQKVGAERFDK 329

Query: 324 EYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHFSEENLRAALSKMGVG 503
           EYAY IRHNYG+EGKRTDYTPY+CQKII STPG GDHHGCPYRHFSEENLRAALS MGV 
Sbjct: 330 EYAYSIRHNYGREGKRTDYTPYACQKIISSTPGVGDHHGCPYRHFSEENLRAALSGMGVN 389

Query: 504 GRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQYFTDSQ 644
             +++DVM+KVRNRHYQLACTLTFEA+HG SCDAGINHPNQYF+DSQ
Sbjct: 390 SGAVDDVMDKVRNRHYQLACTLTFEAIHGLSCDAGINHPNQYFSDSQ 436


>ref|XP_002303780.1| predicted protein [Populus trichocarpa] gi|222841212|gb|EEE78759.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  296 bits (757), Expect = 5e-78
 Identities = 136/167 (81%), Positives = 146/167 (87%)
 Frame = +3

Query: 144 SFPLCMRHLFEKLKEDHHLKHGGRMQXXXXXXXXXXXXEDALAFWKAEFSHKVGAERFDK 323
           SFPLCMRHLFEKL+EDHHLKHGGRMQ            +DALAFWKAEFS KVGAERFDK
Sbjct: 278 SFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQKVGAERFDK 337

Query: 324 EYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHFSEENLRAALSKMGVG 503
           EYAY IRHNYG+EGKRTDYTPYSCQKII STPG GDHHGCPYRHFSEENLRAALS+MGV 
Sbjct: 338 EYAYSIRHNYGREGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALSRMGVN 397

Query: 504 GRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQYFTDSQ 644
              ME+VM+KVRNRHYQLACTLTFE++HG+S DAGINHPNQYF+DSQ
Sbjct: 398 SGEMENVMDKVRNRHYQLACTLTFESIHGSSYDAGINHPNQYFSDSQ 444


>ref|XP_003524908.1| PREDICTED: probable DNA primase large subunit-like [Glycine max]
          Length = 457

 Score =  294 bits (752), Expect = 2e-77
 Identities = 134/167 (80%), Positives = 146/167 (87%)
 Frame = +3

Query: 144 SFPLCMRHLFEKLKEDHHLKHGGRMQXXXXXXXXXXXXEDALAFWKAEFSHKVGAERFDK 323
           SFPLCMRHLF+KLKEDHHLKHGGRMQ            +DALAFW++EFS KVG E+F+K
Sbjct: 280 SFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRSEFSKKVGLEKFEK 339

Query: 324 EYAYGIRHNYGKEGKRTDYTPYSCQKIILSTPGAGDHHGCPYRHFSEENLRAALSKMGVG 503
           +YAY IRHNYGKEGKRTDYTPYSCQKII STPGAGDHHGCPYRHFSEENLRAALS MGV 
Sbjct: 340 QYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDHHGCPYRHFSEENLRAALSGMGVN 399

Query: 504 GRSMEDVMEKVRNRHYQLACTLTFEAVHGTSCDAGINHPNQYFTDSQ 644
            ++MEDVM+KVRNRHYQLACTLTFEA+HG  CDAGINHPNQYF+DSQ
Sbjct: 400 SQAMEDVMDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQ 446