BLASTX nr result

ID: Coptis23_contig00019968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019968
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51081.1|AC027032_1 hypothetical protein [Arabidopsis thali...    83   1e-19
ref|XP_003606875.1| Helicase-like protein [Medicago truncatula] ...    80   9e-19
ref|XP_003607945.1| Helicase-like protein [Medicago truncatula] ...    80   9e-19
gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza...    78   1e-18
gb|ABA95236.1| AT hook motif-containing protein, putative, expre...    78   1e-18

>gb|AAG51081.1|AC027032_1 hypothetical protein [Arabidopsis thaliana]
          Length = 1678

 Score = 82.8 bits (203), Expect(2) = 1e-19
 Identities = 41/61 (67%), Positives = 45/61 (73%)
 Frame = -3

Query: 313 DLFVTFTCNPKWPEIQSALDKIDKGLRPEDRPDIEARVFKIKLDELMTDLQRKKHFGKAW 134
           DLF+TFTCNPKWPEI    DK  +GL PEDRP+I AR+FKIKLD LM DL  KK  GK  
Sbjct: 728 DLFITFTCNPKWPEITRYYDK--RGLNPEDRPNIIARIFKIKLDSLMNDLTVKKMLGKTV 785

Query: 133 A 131
           A
Sbjct: 786 A 786



 Score = 38.5 bits (88), Expect(2) = 1e-19
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -1

Query: 54  AIYTIEFQKRGLPHAHIL 1
           ++YT+EFQKRGLPHAHIL
Sbjct: 787 SMYTVEFQKRGLPHAHIL 804


>ref|XP_003606875.1| Helicase-like protein [Medicago truncatula]
           gi|355507930|gb|AES89072.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1674

 Score = 79.7 bits (195), Expect(2) = 9e-19
 Identities = 39/61 (63%), Positives = 44/61 (72%)
 Frame = -3

Query: 313 DLFVTFTCNPKWPEIQSALDKIDKGLRPEDRPDIEARVFKIKLDELMTDLQRKKHFGKAW 134
           DLF+TFTCNP WPEIQ  +    KGL+P DRPDI ARVFKIK DEL+ DL +K   GK  
Sbjct: 655 DLFITFTCNPSWPEIQRFVGA--KGLKPHDRPDIIARVFKIKFDELLNDLTKKHILGKVV 712

Query: 133 A 131
           A
Sbjct: 713 A 713



 Score = 38.5 bits (88), Expect(2) = 9e-19
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = -1

Query: 51  IYTIEFQKRGLPHAHIL 1
           +YTIEFQKRGLPHAHIL
Sbjct: 715 MYTIEFQKRGLPHAHIL 731


>ref|XP_003607945.1| Helicase-like protein [Medicago truncatula]
           gi|355509000|gb|AES90142.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1651

 Score = 79.7 bits (195), Expect(2) = 9e-19
 Identities = 39/61 (63%), Positives = 44/61 (72%)
 Frame = -3

Query: 313 DLFVTFTCNPKWPEIQSALDKIDKGLRPEDRPDIEARVFKIKLDELMTDLQRKKHFGKAW 134
           DLF+TFTCNP WPEIQ  +    KGL+P DRPDI ARVFKIK DEL+ DL +K   GK  
Sbjct: 655 DLFITFTCNPSWPEIQRFVGA--KGLKPHDRPDIIARVFKIKFDELLNDLTKKHILGKVV 712

Query: 133 A 131
           A
Sbjct: 713 A 713



 Score = 38.5 bits (88), Expect(2) = 9e-19
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = -1

Query: 51  IYTIEFQKRGLPHAHIL 1
           +YTIEFQKRGLPHAHIL
Sbjct: 715 MYTIEFQKRGLPHAHIL 731


>gb|ABA94947.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
           Group]
          Length = 1682

 Score = 77.8 bits (190), Expect(2) = 1e-18
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = -3

Query: 313 DLFVTFTCNPKWPEIQSALDKIDKGLRPEDRPDIEARVFKIKLDELMTDLQRKKHFGKAW 134
           DLFVTFTCN  WPEIQ+ LD+I    +P DRPDI  RVF IKL ELMTD++ K++FGK  
Sbjct: 676 DLFVTFTCNAAWPEIQNMLDEIGVQ-KPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTL 734

Query: 133 A 131
           A
Sbjct: 735 A 735



 Score = 39.7 bits (91), Expect(2) = 1e-18
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -1

Query: 51  IYTIEFQKRGLPHAHIL 1
           IYTIEFQKRGLPHAHIL
Sbjct: 737 IYTIEFQKRGLPHAHIL 753


>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1682

 Score = 77.8 bits (190), Expect(2) = 1e-18
 Identities = 39/61 (63%), Positives = 46/61 (75%)
 Frame = -3

Query: 313 DLFVTFTCNPKWPEIQSALDKIDKGLRPEDRPDIEARVFKIKLDELMTDLQRKKHFGKAW 134
           DLFVTFTCN  WPEIQ+ LD+I    +P DRPDI  RVF IKL ELMTD++ K++FGK  
Sbjct: 676 DLFVTFTCNAAWPEIQNMLDEIGVQ-KPSDRPDIVDRVFHIKLRELMTDIKDKQYFGKTL 734

Query: 133 A 131
           A
Sbjct: 735 A 735



 Score = 39.7 bits (91), Expect(2) = 1e-18
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -1

Query: 51  IYTIEFQKRGLPHAHIL 1
           IYTIEFQKRGLPHAHIL
Sbjct: 737 IYTIEFQKRGLPHAHIL 753


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