BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019957
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   259   2e-67
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   259   2e-67
ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago tr...   258   4e-67
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   258   5e-67
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   257   7e-67

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  259 bits (662), Expect = 2e-67
 Identities = 127/150 (84%), Positives = 136/150 (90%)
 Frame = -2

Query: 538  SRSLRRAQDVRKQLLTIIDRYGLDVVSAGKEFSKTRKAIVAGFFFHAARKDPQEGYRTLV 359
            SRSLRRAQDVRKQLLTI+D+Y LDVVSAGK F+K RKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1023 SRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLV 1082

Query: 358  KNQPVYIHPSCSLFQRQPDWLI*DELVQTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 179
            +NQPVYIHPS +LFQRQPDW+I  ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1083 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1142

Query: 178  MSKRKRQE*IEPLYNRFDEPNSWRLRKRRA 89
            MSKRKRQE IEPLY+R+ EPNSWRL KRRA
Sbjct: 1143 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1172


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  259 bits (662), Expect = 2e-67
 Identities = 127/150 (84%), Positives = 136/150 (90%)
 Frame = -2

Query: 538  SRSLRRAQDVRKQLLTIIDRYGLDVVSAGKEFSKTRKAIVAGFFFHAARKDPQEGYRTLV 359
            SRSLRRAQDVRKQLLTI+D+Y LDVVSAGK F+K RKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1026 SRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLV 1085

Query: 358  KNQPVYIHPSCSLFQRQPDWLI*DELVQTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 179
            +NQPVYIHPS +LFQRQPDW+I  ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1086 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1145

Query: 178  MSKRKRQE*IEPLYNRFDEPNSWRLRKRRA 89
            MSKRKRQE IEPLY+R+ EPNSWRL KRRA
Sbjct: 1146 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1175


>ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago truncatula]
            gi|355481780|gb|AES62983.1| ATP-dependent RNA helicase
            DHX8 [Medicago truncatula]
          Length = 1154

 Score =  258 bits (659), Expect = 4e-67
 Identities = 125/150 (83%), Positives = 136/150 (90%)
 Frame = -2

Query: 538  SRSLRRAQDVRKQLLTIIDRYGLDVVSAGKEFSKTRKAIVAGFFFHAARKDPQEGYRTLV 359
            SRSLRRAQDVRKQLL+I+D+Y LD+VSAGK FSK RKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1005 SRSLRRAQDVRKQLLSIMDKYKLDIVSAGKNFSKIRKAITAGFFFHAARKDPQEGYRTLV 1064

Query: 358  KNQPVYIHPSCSLFQRQPDWLI*DELVQTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 179
            +NQPVYIHPS +LFQRQPDW+I  ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1065 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1124

Query: 178  MSKRKRQE*IEPLYNRFDEPNSWRLRKRRA 89
            MSKRKRQE +EPLY+R+ EPNSWRL KRRA
Sbjct: 1125 MSKRKRQERVEPLYDRYHEPNSWRLSKRRA 1154


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  258 bits (658), Expect = 5e-67
 Identities = 126/150 (84%), Positives = 136/150 (90%)
 Frame = -2

Query: 538  SRSLRRAQDVRKQLLTIIDRYGLDVVSAGKEFSKTRKAIVAGFFFHAARKDPQEGYRTLV 359
            SRSLRRAQDVRKQLL+I+D+Y LDVVSAGK F+K RKAI AGFFFHAARKDPQEGYRTLV
Sbjct: 1028 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLV 1087

Query: 358  KNQPVYIHPSCSLFQRQPDWLI*DELVQTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 179
            +NQPVYIHPS +LFQRQPDW+I  ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TK
Sbjct: 1088 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1147

Query: 178  MSKRKRQE*IEPLYNRFDEPNSWRLRKRRA 89
            MSKRKRQE IEPLY+R+ EPNSWRL KRRA
Sbjct: 1148 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1177


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  257 bits (657), Expect = 7e-67
 Identities = 125/150 (83%), Positives = 136/150 (90%)
 Frame = -2

Query: 538  SRSLRRAQDVRKQLLTIIDRYGLDVVSAGKEFSKTRKAIVAGFFFHAARKDPQEGYRTLV 359
            SRSLRRAQDVRKQLLTI+D+Y LDVVSAGK F+K RKAI AGFFFHA+RKDPQEGYRTLV
Sbjct: 1048 SRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKVRKAITAGFFFHASRKDPQEGYRTLV 1107

Query: 358  KNQPVYIHPSCSLFQRQPDWLI*DELVQTTKEYMRECTAVDPKWLVELAPRFFKVADSTK 179
            +NQPVYIHPS +LFQRQPDW+I  ELV TTKEYMRE T +DPKWLVELAPR+FKVAD TK
Sbjct: 1108 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTK 1167

Query: 178  MSKRKRQE*IEPLYNRFDEPNSWRLRKRRA 89
            MSKRKRQE IEPLY+R+ EPNSWRL KRRA
Sbjct: 1168 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1197