BLASTX nr result

ID: Coptis23_contig00019946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019946
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80532.1| hypothetical protein VITISV_035958 [Vitis vinifera]    59   4e-07
emb|CAN83027.1| hypothetical protein VITISV_012956 [Vitis vinifera]    57   2e-06
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]    57   2e-06
emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]    56   3e-06
emb|CAN70399.1| hypothetical protein VITISV_023214 [Vitis vinifera]    56   3e-06

>emb|CAN80532.1| hypothetical protein VITISV_035958 [Vitis vinifera]
          Length = 1287

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +2

Query: 89  PFRFNIAWTSHQSFKDLIQSHWPGFL-RGSPIYRFTQKLKILKPVQKEWNWNTFGELEQK 265
           PF+F   W   + FKDLI   W G + RGSP YR   KLK LK + K WN   FG LE+ 
Sbjct: 487 PFKFENMWLKAEGFKDLIGGWWQGIVVRGSPNYRLAIKLKGLKQILKIWNKEVFGSLERN 546

Query: 266 VTE 274
             E
Sbjct: 547 KAE 549


>emb|CAN83027.1| hypothetical protein VITISV_012956 [Vitis vinifera]
          Length = 874

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +2

Query: 38  HAPLLGYAASIPKPRNCPFRFNIAWTSHQSFKDLIQSHWPGF-LRGSPIYRFTQKLKILK 214
           H P+L    S+ +    PFRF   W   + FKDLI++ W G  +RGS  +R T KLK LK
Sbjct: 436 HFPVLLEGGSLRRGPT-PFRFENMWFKVEGFKDLIRNWWXGIEVRGSAGFRLTAKLKELK 494

Query: 215 PVQKEWNWNTFGELE 259
              K WN   FG LE
Sbjct: 495 QKLKVWNREVFGNLE 509


>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
          Length = 996

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +2

Query: 89  PFRFNIAWTSHQSFKDLIQSHWPGF-LRGSPIYRFTQKLKILKPVQKEWNWNTFGELE 259
           PFRF   W   + F++LI S W G  +RGS  +R   KLK++K   KEWN   FG LE
Sbjct: 131 PFRFENMWLKVEGFQELIHSWWQGIEVRGSASFRLVTKLKVVKQKLKEWNREVFGRLE 188


>emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
          Length = 1875

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +2

Query: 89   PFRFNIAWTSHQSFKDLIQSHWPG-FLRGSPIYRFTQKLKILKPVQKEWNWNTFGELE 259
            PFRF   W     FKDL++  W G  +RG   +R   KLK+LK   KEWN   FG LE
Sbjct: 976  PFRFENMWLKVDGFKDLLREWWQGTVVRGKASFRLASKLKVLKQKIKEWNREVFGRLE 1033


>emb|CAN70399.1| hypothetical protein VITISV_023214 [Vitis vinifera]
          Length = 844

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +2

Query: 89  PFRFNIAWTSHQSFKDLIQSHWP-GFLRGSPIYRFTQKLKILKPVQKEWNWNTFGELEQK 265
           PFRF   W   +  KDL++  W  G   GSP +   +KLK LK   KEWN NTFG +E +
Sbjct: 189 PFRFENMWLKVEGVKDLLKYWWEEGSFSGSPSFILAKKLKFLKAKLKEWNXNTFGRVEYR 248


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