BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019933
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34863.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   103   1e-20
ref|XP_004164733.1| PREDICTED: nuclear pore membrane glycoprotei...   100   1e-19
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...    98   9e-19
ref|XP_003576860.1| PREDICTED: nuclear pore membrane glycoprotei...    98   9e-19

>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  113 bits (282), Expect = 2e-23
 Identities = 66/139 (47%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
 Frame = -3

Query: 543  VKALRAVRFKDKVIFVLPAAGQRVELDINYDPGFEPXXXXXXXXXXXACV--SFAALIVT 370
            VK L+A +FKDKV+  LPA GQRVELD++YDPG              A V    A L++T
Sbjct: 1824 VKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAYSVSTVKVTLWAGVVGCIALLLLT 1883

Query: 369  LVL----ANRFXXXXXXXXXXXXXXAGPVTPDPTISPTYNTEQSPRTPQPFIQYVRRTID 202
            L +     +R                 P TPD   SP    + SPRTPQPF++YVRRTI 
Sbjct: 1884 LAIFIFFLDRPDRARPSNPPANSSIVAPTTPDRR-SPAVQNDSSPRTPQPFVEYVRRTIH 1942

Query: 201  ETPYYKRDARRRVNPQNTY 145
            ETPYY R+ RRRVNPQNTY
Sbjct: 1943 ETPYYTREGRRRVNPQNTY 1961


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/140 (42%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
 Frame = -3

Query: 543  VKALRAVRFKDKVIFVLPAAGQRVELDINYDPGFEPXXXXXXXXXXXACV--SFAALIVT 370
            VK L+A RFKD++I  LPA GQ VE+DIN++P               A +      LI++
Sbjct: 1837 VKLLKAKRFKDRIIITLPANGQSVEIDINHEPEETASSSVTINKAFWASILGYLLLLILS 1896

Query: 369  LVLANRF------XXXXXXXXXXXXXXAGPVTPDPTISPTYNTEQSPRTPQPFIQYVRRT 208
            + +  RF                    A P TPD +   +   + SPRTPQPF+ YVR+T
Sbjct: 1897 IAIITRFLDRPERSQQTSSSVTTTPSIAAPTTPDRSTPSSVVNDSSPRTPQPFVDYVRKT 1956

Query: 207  IDETPYYKRDARRRVNPQNT 148
            IDETPYYKR+ RRR+NPQNT
Sbjct: 1957 IDETPYYKREGRRRINPQNT 1976


>ref|XP_004164733.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
           sativus]
          Length = 203

 Score =  100 bits (250), Expect = 1e-19
 Identities = 61/146 (41%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
 Frame = -3

Query: 543 VKALRAVRFKDKVIFVLPAAGQRVELDINYDPGFEPXXXXXXXXXXXACV---SFAALIV 373
           VKA+   RF+DK++  L A GQR E+D+ YDPG +                  S + LI+
Sbjct: 59  VKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEASETVFDTTTIWATVLGSLSLLIL 118

Query: 372 TLVL----------ANRFXXXXXXXXXXXXXXAGPVTPDPTISPTYNTEQSPRTPQPFIQ 223
           T+ L          A                 A P TPD + SP  + EQSPRTPQPF+ 
Sbjct: 119 TITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDRS-SPVISNEQSPRTPQPFVD 177

Query: 222 YVRRTIDETPYYKRDARRRVNPQNTY 145
           YVR+TIDETPYYKR+ RRR N QNT+
Sbjct: 178 YVRQTIDETPYYKREGRRRFNVQNTF 203


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 59/132 (44%), Positives = 72/132 (54%), Gaps = 6/132 (4%)
 Frame = -3

Query: 543  VKALRAVRFKDKVIFVLPAAGQRVELDINYDPGFEPXXXXXXXXXXXACV--SFAALIVT 370
            VK L+A +FKDKV+  LPA GQRVELD++YDPG              A V    A L++T
Sbjct: 1898 VKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAYSVSTVKVTLWAGVVGCIALLLLT 1957

Query: 369  LVL----ANRFXXXXXXXXXXXXXXAGPVTPDPTISPTYNTEQSPRTPQPFIQYVRRTID 202
            L +     +R                 P TPD   SP    + SPRTPQPF++YVRRTI 
Sbjct: 1958 LAIFIFFLDRPDRARPSNPPANSSIVAPTTPDRR-SPAVQNDSSPRTPQPFVEYVRRTIH 2016

Query: 201  ETPYYKRDARRR 166
            ETPYY R+ RRR
Sbjct: 2017 ETPYYTREGRRR 2028


>ref|XP_003576860.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Brachypodium
            distachyon]
          Length = 1962

 Score = 97.8 bits (242), Expect = 9e-19
 Identities = 60/139 (43%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
 Frame = -3

Query: 543  VKALRAVRFKDKVIFVLPAAGQRVELDINYDPGF--EPXXXXXXXXXXXACVSFAALIVT 370
            V+AL+   F DKV  VLPA GQ  E+++ Y  G   EP                   I T
Sbjct: 1826 VEALKRQSFSDKVTIVLPATGQTEEVEVGYVTGDRPEPSSSSGLTTLAVILTCIVVPIAT 1885

Query: 369  LVLANRFXXXXXXXXXXXXXXAGP----VTPDPTISPTYNTEQSPRTPQPFIQYVRRTID 202
            L L  +                 P    V PDP  SP  N + SPRTPQPF++YVR+T+D
Sbjct: 1886 LALFMKLLEKPARQAPSRRAAPAPAGPAVAPDPA-SPA-NGQFSPRTPQPFMEYVRKTVD 1943

Query: 201  ETPYYKRDARRRVNPQNTY 145
            +TPYYKRDARRR NPQNTY
Sbjct: 1944 DTPYYKRDARRRFNPQNTY 1962