BLASTX nr result

ID: Coptis23_contig00019905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019905
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein ...   181   6e-44
ref|XP_002305244.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002513660.1| conserved hypothetical protein [Ricinus comm...   178   4e-43
ref|XP_004157180.1| PREDICTED: uncharacterized membrane protein ...   177   1e-42
ref|XP_004140757.1| PREDICTED: uncharacterized membrane protein ...   177   1e-42

>ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein yjcL-like [Vitis
           vinifera] gi|302143806|emb|CBI22667.3| unnamed protein
           product [Vitis vinifera]
          Length = 449

 Score =  181 bits (459), Expect = 6e-44
 Identities = 92/106 (86%), Positives = 101/106 (95%)
 Frame = +1

Query: 1   TGAFGIWSENTKIGSALSGALVSTLVGLAASNLGIISSEARAYSIVMEYLLPIAVPLLLF 180
           TGAFGIWSE TKIGSALSGALVSTLVGLAASNLGIIS EA AYS+V+ +LLP+AVPLLLF
Sbjct: 91  TGAFGIWSEKTKIGSALSGALVSTLVGLAASNLGIISCEAPAYSVVLNFLLPLAVPLLLF 150

Query: 181 RADLRRVIKSTGALFLAFLLGSVATTIGTVVAYLLVPMRSLGQDSW 318
           RADLRRVI+STGAL +AFL+GSVATTIGTVVA+L+VPMRSLGQDSW
Sbjct: 151 RADLRRVIQSTGALLMAFLIGSVATTIGTVVAFLMVPMRSLGQDSW 196


>ref|XP_002305244.1| predicted protein [Populus trichocarpa] gi|222848208|gb|EEE85755.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  179 bits (453), Expect = 3e-43
 Identities = 90/106 (84%), Positives = 101/106 (95%)
 Frame = +1

Query: 1   TGAFGIWSENTKIGSALSGALVSTLVGLAASNLGIISSEARAYSIVMEYLLPIAVPLLLF 180
           TGAFGIWSE TKIGSALSGALVSTLVGLAASNLGIIS E+ AYSIV+++LLP+AVPLLLF
Sbjct: 21  TGAFGIWSERTKIGSALSGALVSTLVGLAASNLGIISCESPAYSIVLKFLLPLAVPLLLF 80

Query: 181 RADLRRVIKSTGALFLAFLLGSVATTIGTVVAYLLVPMRSLGQDSW 318
           RADLRRVI+STG L LAFLLGSVATT+GTV+AY++VPMR+LGQDSW
Sbjct: 81  RADLRRVIQSTGTLLLAFLLGSVATTVGTVLAYMMVPMRALGQDSW 126


>ref|XP_002513660.1| conserved hypothetical protein [Ricinus communis]
           gi|223547568|gb|EEF49063.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 965

 Score =  178 bits (452), Expect = 4e-43
 Identities = 90/106 (84%), Positives = 99/106 (93%)
 Frame = +1

Query: 1   TGAFGIWSENTKIGSALSGALVSTLVGLAASNLGIISSEARAYSIVMEYLLPIAVPLLLF 180
           TGAFGIWSE TKIGSALSGALVSTLVGLA SNLGIIS E+ AY++V+E+LLP+AVPLLLF
Sbjct: 104 TGAFGIWSEKTKIGSALSGALVSTLVGLAGSNLGIISCESPAYAVVLEFLLPLAVPLLLF 163

Query: 181 RADLRRVIKSTGALFLAFLLGSVATTIGTVVAYLLVPMRSLGQDSW 318
           RADLRRVI+STG L LAFLLGSVATT+GTVVAY +VPMRSLGQDSW
Sbjct: 164 RADLRRVIRSTGTLLLAFLLGSVATTVGTVVAYWIVPMRSLGQDSW 209



 Score =  164 bits (415), Expect = 7e-39
 Identities = 82/106 (77%), Positives = 93/106 (87%)
 Frame = +1

Query: 1   TGAFGIWSENTKIGSALSGALVSTLVGLAASNLGIISSEARAYSIVMEYLLPIAVPLLLF 180
           TGAFGIWSE TK+GS +S ALVSTLVGLAASN+GII  E  AYS+V+E+LLP+ VPLLLF
Sbjct: 607 TGAFGIWSEGTKVGSMVSAALVSTLVGLAASNIGIIPYETAAYSLVLEFLLPLTVPLLLF 666

Query: 181 RADLRRVIKSTGALFLAFLLGSVATTIGTVVAYLLVPMRSLGQDSW 318
           RADLR VI+STG LFLAFLLGSVAT IGT VA+L+VPMRSLG D+W
Sbjct: 667 RADLRNVIRSTGKLFLAFLLGSVATIIGTTVAFLMVPMRSLGPDNW 712


>ref|XP_004157180.1| PREDICTED: uncharacterized membrane protein YjcL-like [Cucumis
           sativus]
          Length = 463

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/105 (84%), Positives = 98/105 (93%)
 Frame = +1

Query: 4   GAFGIWSENTKIGSALSGALVSTLVGLAASNLGIISSEARAYSIVMEYLLPIAVPLLLFR 183
           GAFGIWSE TK+GSALSGALVSTLVGLAASN GII+S+A A++IV+E+LLP+AVPLLLFR
Sbjct: 106 GAFGIWSEKTKVGSALSGALVSTLVGLAASNFGIIASDAPAFAIVLEFLLPLAVPLLLFR 165

Query: 184 ADLRRVIKSTGALFLAFLLGSVATTIGTVVAYLLVPMRSLGQDSW 318
           ADLRRVIKSTG L LAFLLGSV TT+GTVVAY LVPMRSLGQDSW
Sbjct: 166 ADLRRVIKSTGTLLLAFLLGSVGTTVGTVVAYFLVPMRSLGQDSW 210


>ref|XP_004140757.1| PREDICTED: uncharacterized membrane protein YjcL-like [Cucumis
           sativus]
          Length = 463

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/105 (84%), Positives = 98/105 (93%)
 Frame = +1

Query: 4   GAFGIWSENTKIGSALSGALVSTLVGLAASNLGIISSEARAYSIVMEYLLPIAVPLLLFR 183
           GAFGIWSE TK+GSALSGALVSTLVGLAASN GII+S+A A++IV+E+LLP+AVPLLLFR
Sbjct: 106 GAFGIWSEKTKVGSALSGALVSTLVGLAASNFGIIASDAPAFAIVLEFLLPLAVPLLLFR 165

Query: 184 ADLRRVIKSTGALFLAFLLGSVATTIGTVVAYLLVPMRSLGQDSW 318
           ADLRRVIKSTG L LAFLLGSV TT+GTVVAY LVPMRSLGQDSW
Sbjct: 166 ADLRRVIKSTGTLLLAFLLGSVGTTVGTVVAYFLVPMRSLGQDSW 210


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