BLASTX nr result

ID: Coptis23_contig00019897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019897
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27884.3| unnamed protein product [Vitis vinifera]              460   e-127
ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1...   454   e-125
ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-1...   447   e-123
ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806...   444   e-122
ref|XP_003541292.1| PREDICTED: eukaryotic initiation factor 4A-1...   441   e-121

>emb|CBI27884.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  460 bits (1184), Expect = e-127
 Identities = 230/373 (61%), Positives = 273/373 (73%), Gaps = 12/373 (3%)
 Frame = +1

Query: 10   DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLLNTPEIIVAAXXXXXXXXXXXXXX 189
            DAR WDE+ Y++SILKERE+Q+ TVFR +FAP QN    P++IV A              
Sbjct: 4    DARDWDEDGYRNSILKEREIQTRTVFRAIFAPSQN--PNPDVIVVASSDGTLASYSISSC 61

Query: 190  XXXXXXXXXXL---------VAEPICLLRGHNGPAYDVKFYXXXXXXXXXXXX---RIQG 333
                                VAEP C L+GH+GPAYDVKFY               RI+G
Sbjct: 62   ISQLSGFGNARPRKSLLGLPVAEPNCFLQGHDGPAYDVKFYGDGEESLLLSCGDDGRIRG 121

Query: 334  WKWNQLLDSDIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAA 513
            W+W ++  S++ I +QG  +EP+L+LVNPQHKGPWGALSP+PENNAIA+++Q GS+F+AA
Sbjct: 122  WRWKEITQSEVHIPLQGNHVEPVLDLVNPQHKGPWGALSPVPENNAIAVNAQWGSVFAAA 181

Query: 514  GDSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHV 693
            GDS AYCWDVE +KIKMVFKGHSDYLHCI ARNSSNQIITGSEDGT R WDC+SGKCI V
Sbjct: 182  GDSCAYCWDVEKSKIKMVFKGHSDYLHCIIARNSSNQIITGSEDGTARIWDCQSGKCIQV 241

Query: 694  IDPAKNSELKGTFSWISCIALDASETWLAFSSGKTLSIWNLPASEPVTRVVTGYPIQDLL 873
            ID  K+ + K  FS +SCIALDASE+WLA+  G++LS+WNLPA E VTRV T    QD++
Sbjct: 242  IDAKKDKKPKEIFSCVSCIALDASESWLAYGRGRSLSVWNLPACERVTRVSTHASFQDIV 301

Query: 874  FDENQILAVGAEPVLSRFDMNGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQ 1053
            FD+NQILAVGAEP+LSRFD+NG  LSQI CAPQS FSVSLH SGVTAV GYGG+VD+ISQ
Sbjct: 302  FDDNQILAVGAEPLLSRFDINGVILSQIQCAPQSAFSVSLHPSGVTAVAGYGGVVDVISQ 361

Query: 1054 FGSHLCTLCCRGR 1092
            FGSHLCT   RGR
Sbjct: 362  FGSHLCTF--RGR 372


>ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1-like [Cucumis sativus]
            gi|449489893|ref|XP_004158451.1| PREDICTED: WD
            repeat-containing protein DWA1-like [Cucumis sativus]
          Length = 369

 Score =  454 bits (1169), Expect = e-125
 Identities = 221/368 (60%), Positives = 267/368 (72%), Gaps = 7/368 (1%)
 Frame = +1

Query: 10   DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLLNTPEIIVAAXXXXXXXXXXXXXX 189
            DA  WDE  Y+ SI KERE+Q+ TVFRT +AP  N    PE IVAA              
Sbjct: 4    DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN--GCPETIVAASSDGSVASYSIASC 61

Query: 190  XXXXXXXXXX----LVAEPICLLRGHNGPAYDVKFYXXXXXXXXXXXX---RIQGWKWNQ 348
                          L AEP C L+GH+GP YDVKFY                I+GW+W  
Sbjct: 62   ISKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRD 121

Query: 349  LLDSDIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGDSFA 528
              D  +PIS+QG  +EP+++L+NPQ KGPWGALSPIPENNAIA D+Q GSIFSAAGDS A
Sbjct: 122  CTDIKVPISLQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCA 181

Query: 529  YCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVIDPAK 708
            YCWD+E+ K+KMVFKGHSDYLHCI ARN+ NQIITGSEDGT R WDCKSGKCI +IDPAK
Sbjct: 182  YCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAK 241

Query: 709  NSELKGTFSWISCIALDASETWLAFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQ 888
            + +LKG FS++ CIALDASE+WLA + G+++S+WNLP+SE +++ +T   +QD++F +NQ
Sbjct: 242  DKKLKGHFSFVRCIALDASESWLACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDNQ 301

Query: 889  ILAVGAEPVLSRFDMNGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQFGSHL 1068
            IL VGAEP L+RFD+NG+ LSQI CAPQS FSV+LH SGV AVGGYGGLVD+ISQFGSHL
Sbjct: 302  ILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSHL 361

Query: 1069 CTLCCRGR 1092
            CT CC+ R
Sbjct: 362  CTFCCQYR 369


>ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-15-like [Vitis vinifera]
          Length = 803

 Score =  447 bits (1149), Expect = e-123
 Identities = 224/368 (60%), Positives = 266/368 (72%), Gaps = 13/368 (3%)
 Frame = +1

Query: 10   DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLLNTPEIIVAAXXXXXXXXXXXXXX 189
            DAR WDE+ Y++SILKERE+Q+ TVFR +FAP QN    P++IV A              
Sbjct: 4    DARDWDEDGYRNSILKEREIQTRTVFRAIFAPSQN--PNPDVIVVASSDGTLASYSISSC 61

Query: 190  XXXXXXXXXXL----------VAEPICLLRGHNGPAYDVKFYXXXXXXXXXXXX---RIQ 330
                                 VAEP C L+GH+GPAYDVKFY               RI+
Sbjct: 62   ISQLQSGFGNARPRKSLLGLPVAEPNCFLQGHDGPAYDVKFYGDGEESLLLSCGDDGRIR 121

Query: 331  GWKWNQLLDSDIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSA 510
            GW+W ++  S++        +EP+L+LVNPQHKGPWGALSP+PENNAIA+++Q GS+F+A
Sbjct: 122  GWRWKEITQSEV------HHVEPVLDLVNPQHKGPWGALSPVPENNAIAVNAQWGSVFAA 175

Query: 511  AGDSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIH 690
            AGDS AYCWDVE +KIKMVFKGHSDYLHCI ARNSSNQIITGSEDGT R WDC+SGKCI 
Sbjct: 176  AGDSCAYCWDVEKSKIKMVFKGHSDYLHCIIARNSSNQIITGSEDGTARIWDCQSGKCIQ 235

Query: 691  VIDPAKNSELKGTFSWISCIALDASETWLAFSSGKTLSIWNLPASEPVTRVVTGYPIQDL 870
            VID  K+ + K  FS +SCIALDASE+WLA+  G++LS+WNLPA E VTRV T    QD+
Sbjct: 236  VIDAKKDKKPKEIFSCVSCIALDASESWLAYGRGRSLSVWNLPACERVTRVSTHASFQDI 295

Query: 871  LFDENQILAVGAEPVLSRFDMNGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIIS 1050
            +FD+NQILAVGAEP+LSRFD+NG  LSQI CAPQS FSVSLH SGVTAV GYGG+VD+IS
Sbjct: 296  VFDDNQILAVGAEPLLSRFDINGVILSQIQCAPQSAFSVSLHPSGVTAVAGYGGVVDVIS 355

Query: 1051 QFGSHLCT 1074
            QFGSHLCT
Sbjct: 356  QFGSHLCT 363


>ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806423 [Glycine max]
          Length = 863

 Score =  444 bits (1141), Expect = e-122
 Identities = 210/369 (56%), Positives = 267/369 (72%), Gaps = 10/369 (2%)
 Frame = +1

Query: 10   DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQN-------LLNTPEIIVAAXXXXXXX 168
            DA  WDE+ Y+ +ILKERE+Q+ TVFRT +AP          L ++   + +        
Sbjct: 4    DATNWDEDAYRETILKEREIQTRTVFRTAWAPPYTSNLDTLILASSDGSVASYSISSSIA 63

Query: 169  XXXXXXXXXXXXXXXXXLVAEPICLLRGHNGPAYDVKFYXXXXXXXXXXXX---RIQGWK 339
                             L+AEP C ++ H+GPAYDV+FY               RI+GW+
Sbjct: 64   ASKIKNPFGFVNADTDELLAEPNCFVQAHDGPAYDVRFYGDGEDALLLSCGDDGRIRGWR 123

Query: 340  WNQLLDSDIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGD 519
            WN+   S+  +S QG D++P+L++VNPQHKGPWGALSPIPENNAIA+++QGGS+F+A+GD
Sbjct: 124  WNEFSSSNYSVSSQGNDIKPVLDVVNPQHKGPWGALSPIPENNAIAVNTQGGSVFAASGD 183

Query: 520  SFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVID 699
            S AYCWDVET K+KMVFKGH DYLHCI ARNS +QIITGSEDGT R WDCKSGKC  VID
Sbjct: 184  SCAYCWDVETGKVKMVFKGHMDYLHCIVARNSLDQIITGSEDGTTRIWDCKSGKCTQVID 243

Query: 700  PAKNSELKGTFSWISCIALDASETWLAFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFD 879
            PA++ +LKG+ SW+ C+ALDASE+WLA SSG+ +S+WNLPASE ++++ T   +QD+LFD
Sbjct: 244  PARDLKLKGSASWVGCVALDASESWLACSSGRNISLWNLPASECISKIPTRACVQDMLFD 303

Query: 880  ENQILAVGAEPVLSRFDMNGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQFG 1059
             NQIL VG +P+L+RFDMNGT LSQI CAP S FS+SLH +GV AVGGYG LVD+ISQFG
Sbjct: 304  NNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVISQFG 363

Query: 1060 SHLCTLCCR 1086
            SH+CT  C+
Sbjct: 364  SHMCTFHCQ 372


>ref|XP_003541292.1| PREDICTED: eukaryotic initiation factor 4A-15-like [Glycine max]
          Length = 821

 Score =  441 bits (1134), Expect = e-121
 Identities = 213/381 (55%), Positives = 271/381 (71%), Gaps = 11/381 (2%)
 Frame = +1

Query: 10   DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLLNTPEIIVAAXXXXXXXXXXXXXX 189
            DA  WDE+ Y+ ++L+ERE+Q+ TVFRT +AP     N   ++VA+              
Sbjct: 4    DATNWDEDAYRETVLREREIQTRTVFRTAWAPPYTS-NLDTLLVASSDGSVASYSISSSV 62

Query: 190  XXXXXXXXXX--------LVAEPICLLRGHNGPAYDVKFYXXXXXXXXXXXX---RIQGW 336
                              L+AEP C ++ H GPAYDVKFY               +I+GW
Sbjct: 63   VASKLKNPFGFVNADTDELLAEPNCFVQAHAGPAYDVKFYGDGEDALLLSCGDDGQIRGW 122

Query: 337  KWNQLLDSDIPISMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAG 516
            +W +   S+  +S QG D++P+L++VNPQHKGPWGALSP+PENNAIA+++QGGS+F+A+G
Sbjct: 123  RWKEFSSSNYSVSSQGNDIKPVLDVVNPQHKGPWGALSPVPENNAIAVNTQGGSVFAASG 182

Query: 517  DSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCIHVI 696
            DS AYCWDVET K+KMVFKGH DYLHCI ARNSSNQIITGSEDGT R WDCKSGKC  VI
Sbjct: 183  DSCAYCWDVETGKVKMVFKGHMDYLHCIVARNSSNQIITGSEDGTTRIWDCKSGKCTQVI 242

Query: 697  DPAKNSELKGTFSWISCIALDASETWLAFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLF 876
            DPA++ +LKG+ SW+ C+ALDASE+WLA SSG+ +S+WNLPASE V+++ T   +QD+ F
Sbjct: 243  DPARDLKLKGSASWVGCVALDASESWLACSSGRNISLWNLPASECVSKIPTRACVQDMSF 302

Query: 877  DENQILAVGAEPVLSRFDMNGTALSQINCAPQSGFSVSLHSSGVTAVGGYGGLVDIISQF 1056
            D NQIL VG +P+L+RFDMNGT LSQI CAP S FS+SLH +GV AVGGYG LVD+ISQF
Sbjct: 303  DNNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVISQF 362

Query: 1057 GSHLCTLCCRGR*CIALSGFS 1119
            GSH+CT  C+   C+ L  F+
Sbjct: 363  GSHMCTFRCQF--CVLLFDFT 381


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