BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019888
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB28725.2| flavin-type blue-light photoreceptor [Arabidopsis...   176   2e-42
gb|AAD17364.1| Arabidopsis thaliana flavin-type blue-light photo...   176   2e-42
pdb|1U3C|A Chain A, Crystal Structure Of The Phr Domain Of Crypt...   176   2e-42
gb|AAB28724.1| flavin-type blue-light photoreceptor [Arabidopsis...   176   2e-42
prf||1924377A blue light photoreceptor                                176   2e-42

>gb|AAB28725.2| flavin-type blue-light photoreceptor [Arabidopsis thaliana]
          Length = 556

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -1

Query: 343 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLK 164
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWLK
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLK 64

Query: 163 HXXXXXXXXXXXXGTSFITKRSTDSISSLIRVVKDTGATRLFFNHLYDPISLVR 2
           +            GT  ITKRSTDS++SL+ VVK TGA+++FFNHLYDP+SLVR
Sbjct: 65  NSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVR 118


>gb|AAD17364.1| Arabidopsis thaliana flavin-type blue-light photoreceptor
           (SW:Q43125) (Pfam: PF00875, Score=765.2, E=2.6e-226,
           N=1) [Arabidopsis thaliana]
          Length = 702

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -1

Query: 343 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLK 164
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWLK
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLK 64

Query: 163 HXXXXXXXXXXXXGTSFITKRSTDSISSLIRVVKDTGATRLFFNHLYDPISLVR 2
           +            GT  ITKRSTDS++SL+ VVK TGA+++FFNHLYDP+SLVR
Sbjct: 65  NSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVR 118


>pdb|1U3C|A Chain A, Crystal Structure Of The Phr Domain Of Cryptochrome 1 From
           Arabidopsis Thaliana gi|52695978|pdb|1U3D|A Chain A,
           Crystal Structure Of The Phr Domain Of Cryptochrome 1
           From Arabidopsis Thaliana With Amppnp Bound
          Length = 509

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -1

Query: 343 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLK 164
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWLK
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLK 64

Query: 163 HXXXXXXXXXXXXGTSFITKRSTDSISSLIRVVKDTGATRLFFNHLYDPISLVR 2
           +            GT  ITKRSTDS++SL+ VVK TGA+++FFNHLYDP+SLVR
Sbjct: 65  NSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVR 118


>gb|AAB28724.1| flavin-type blue-light photoreceptor [Arabidopsis thaliana]
          Length = 681

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -1

Query: 343 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLK 164
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWLK
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLK 64

Query: 163 HXXXXXXXXXXXXGTSFITKRSTDSISSLIRVVKDTGATRLFFNHLYDPISLVR 2
           +            GT  ITKRSTDS++SL+ VVK TGA+++FFNHLYDP+SLVR
Sbjct: 65  NSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVR 118


>prf||1924377A blue light photoreceptor
          Length = 681

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = -1

Query: 343 MSGCSGGECTIVWFRRDLRVEDNPALAAAVRAGPVIAVFIWAPEEEGYYHPGRVSRWWLK 164
           +SGC  G C+IVWFRRDLRVEDNPALAAAVRAGPVIA+F+WAPEEEG+YHPGRVSRWWLK
Sbjct: 5   VSGCGSGGCSIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRVSRWWLK 64

Query: 163 HXXXXXXXXXXXXGTSFITKRSTDSISSLIRVVKDTGATRLFFNHLYDPISLVR 2
           +            GT  ITKRSTDS++SL+ VVK TGA+++FFNHLYDP+SLVR
Sbjct: 65  NSLAQLDSSLRSLGTCLITKRSTDSVASLLDVVKSTGASQIFFNHLYDPLSLVR 118