BLASTX nr result

ID: Coptis23_contig00019884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019884
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263358.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   227   7e-58
ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersic...   219   1e-55
ref|XP_003525175.1| PREDICTED: putative 1-aminocyclopropane-1-ca...   217   9e-55
ref|XP_002318328.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-54
gb|ABK95965.1| unknown [Populus trichocarpa]                          216   1e-54

>ref|XP_002263358.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase
           [Vitis vinifera] gi|296088811|emb|CBI38261.3| unnamed
           protein product [Vitis vinifera]
          Length = 381

 Score =  227 bits (579), Expect = 7e-58
 Identities = 107/115 (93%), Positives = 113/115 (98%)
 Frame = +1

Query: 1   PIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKRDDLSGMQLSGNKVRKLEFLMAEAVAQ 180
           PIPSHVFSLAHVPTPIH+WNLPNLPKN +LWIKRDDLSGMQ+SGNKVRKLEFLMA+AVAQ
Sbjct: 28  PIPSHVFSLAHVPTPIHKWNLPNLPKNTQLWIKRDDLSGMQMSGNKVRKLEFLMADAVAQ 87

Query: 181 GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 345
           G+DCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSK+LVD DPGLTGNLLVER
Sbjct: 88  GSDCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKVLVDKDPGLTGNLLVER 142


>ref|NP_001234368.1| D-cysteine desulfhydrase [Solanum lycopersicum]
           gi|186920269|gb|ACC95419.1| D-cysteine desulfhydrase
           [Solanum lycopersicum]
          Length = 425

 Score =  219 bits (559), Expect = 1e-55
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   PIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKRDDLSGMQLSGNKVRKLEFLMAEAVAQ 180
           PIPSH FSL H PTPIH+WNLPNLPKN E+W+KRDD+SGMQLSGNKVRKLEFL+A+AVAQ
Sbjct: 72  PIPSHTFSLGHFPTPIHKWNLPNLPKNTEVWLKRDDMSGMQLSGNKVRKLEFLLADAVAQ 131

Query: 181 GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 345
           GADCI+TIGGIQSNHCRATAVAAKYLNLDCYLILRTSK+LVD DPGLTGNLLV+R
Sbjct: 132 GADCIVTIGGIQSNHCRATAVAAKYLNLDCYLILRTSKLLVDKDPGLTGNLLVDR 186


>ref|XP_003525175.1| PREDICTED: putative 1-aminocyclopropane-1-carboxylate
           deaminase-like [Glycine max]
          Length = 379

 Score =  217 bits (552), Expect = 9e-55
 Identities = 103/115 (89%), Positives = 109/115 (94%)
 Frame = +1

Query: 1   PIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKRDDLSGMQLSGNKVRKLEFLMAEAVAQ 180
           P+PSH FSLAH+PTPIHRWNLPNLP N ELWIKRDDLSGMQLSGNKVRKLEFLMA+A+AQ
Sbjct: 26  PLPSHFFSLAHLPTPIHRWNLPNLPTNTELWIKRDDLSGMQLSGNKVRKLEFLMADAIAQ 85

Query: 181 GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 345
           GAD IITIGGIQSNHCRATAVAAKYLNLDC+LILRTS +LVD DPGLTGNLLVER
Sbjct: 86  GADSIITIGGIQSNHCRATAVAAKYLNLDCFLILRTSDLLVDQDPGLTGNLLVER 140


>ref|XP_002318328.1| predicted protein [Populus trichocarpa] gi|222859001|gb|EEE96548.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  216 bits (551), Expect = 1e-54
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   PIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKRDDLSGMQLSGNKVRKLEFLMAEAVAQ 180
           PIPSH+FSL H+PTPIH+WNLPNLP N E+++KRDDLSGMQLSGNKVRKLEFLMA+AVAQ
Sbjct: 34  PIPSHIFSLGHLPTPIHKWNLPNLPTNTEVYLKRDDLSGMQLSGNKVRKLEFLMADAVAQ 93

Query: 181 GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 345
           GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILR SK++VD DPGLTGNLLVER
Sbjct: 94  GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRASKVVVDKDPGLTGNLLVER 148


>gb|ABK95965.1| unknown [Populus trichocarpa]
          Length = 387

 Score =  216 bits (551), Expect = 1e-54
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   PIPSHVFSLAHVPTPIHRWNLPNLPKNVELWIKRDDLSGMQLSGNKVRKLEFLMAEAVAQ 180
           PIPSH+FSL H+PTPIH+WNLPNLP N E+++KRDDLSGMQLSGNKVRKLEFLMA+AVAQ
Sbjct: 34  PIPSHIFSLGHLPTPIHKWNLPNLPTNTEVYLKRDDLSGMQLSGNKVRKLEFLMADAVAQ 93

Query: 181 GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRTSKILVDNDPGLTGNLLVER 345
           GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILR SK++VD DPGLTGNLLVER
Sbjct: 94  GADCIITIGGIQSNHCRATAVAAKYLNLDCYLILRASKVVVDKDPGLTGNLLVER 148


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