BLASTX nr result

ID: Coptis23_contig00019879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019879
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880951.1| nodulin family protein [Arabidopsis lyrata s...   186   3e-45
ref|NP_180379.1| major facilitator protein [Arabidopsis thaliana...   186   3e-45
ref|XP_002331452.1| predicted protein [Populus trichocarpa] gi|1...   183   3e-44
ref|XP_002523712.1| conserved hypothetical protein [Ricinus comm...   181   1e-43
ref|XP_003632273.1| PREDICTED: uncharacterized protein LOC100244...   180   2e-43

>ref|XP_002880951.1| nodulin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326790|gb|EFH57210.1| nodulin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 573

 Score =  186 bits (472), Expect = 3e-45
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = -1

Query: 332 NEVIGFMVHVIRGRWFMMFASFVIMVGAGATYLFGTYSKAIKQTLGYTQTTLNLLGFFKD 153
           +E + F++H   GRWFM+FASF+IM  AGATYLFGTYSK IK TLGY QTTLNLLGFFKD
Sbjct: 4   DETVRFLIHFFNGRWFMVFASFLIMACAGATYLFGTYSKDIKSTLGYDQTTLNLLGFFKD 63

Query: 152 LGSNIGVFSGLIAEVTPTWFVLLVGAATNFVGYFMIWLAVTGKIAKPKVW 3
           LG+N+GV SGLIAEVTPTWFVL +G+A NFVGYFMIWL VTGK+AKPKVW
Sbjct: 64  LGANVGVLSGLIAEVTPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVW 113


>ref|NP_180379.1| major facilitator protein [Arabidopsis thaliana]
           gi|4063746|gb|AAC98454.1| nodulin-like protein
           [Arabidopsis thaliana] gi|16209714|gb|AAL14413.1|
           At2g28120/F24D13.9 [Arabidopsis thaliana]
           gi|17064922|gb|AAL32615.1| nodulin-like protein
           [Arabidopsis thaliana] gi|20259958|gb|AAM13326.1|
           nodulin-like protein [Arabidopsis thaliana]
           gi|330252988|gb|AEC08082.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 577

 Score =  186 bits (472), Expect = 3e-45
 Identities = 85/110 (77%), Positives = 96/110 (87%)
 Frame = -1

Query: 332 NEVIGFMVHVIRGRWFMMFASFVIMVGAGATYLFGTYSKAIKQTLGYTQTTLNLLGFFKD 153
           +E + F++H   GRWFM+FASF+IM  AGATYLFGTYSK IK TLGY QTTLNLLGFFKD
Sbjct: 4   DETVRFLIHFFNGRWFMVFASFLIMACAGATYLFGTYSKDIKSTLGYDQTTLNLLGFFKD 63

Query: 152 LGSNIGVFSGLIAEVTPTWFVLLVGAATNFVGYFMIWLAVTGKIAKPKVW 3
           LG+N+GV SGLIAEVTPTWFVL +G+A NFVGYFMIWL VTGK+AKPKVW
Sbjct: 64  LGANVGVLSGLIAEVTPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVW 113


>ref|XP_002331452.1| predicted protein [Populus trichocarpa] gi|118486602|gb|ABK95139.1|
           unknown [Populus trichocarpa]
           gi|222873530|gb|EEF10661.1| predicted protein [Populus
           trichocarpa]
          Length = 559

 Score =  183 bits (464), Expect = 3e-44
 Identities = 86/105 (81%), Positives = 93/105 (88%)
 Frame = -1

Query: 317 FMVHVIRGRWFMMFASFVIMVGAGATYLFGTYSKAIKQTLGYTQTTLNLLGFFKDLGSNI 138
           F VH I GRWF +FASF+IM GAGATYLFGTYSK IK TLGY QTTLNLLGFFKDLG+N+
Sbjct: 7   FAVHAINGRWFSVFASFLIMAGAGATYLFGTYSKDIKATLGYDQTTLNLLGFFKDLGANV 66

Query: 137 GVFSGLIAEVTPTWFVLLVGAATNFVGYFMIWLAVTGKIAKPKVW 3
           GVFSGL+AEVTPTWFVLLVG+A NF GYFMIWLAVT KIA+P VW
Sbjct: 67  GVFSGLLAEVTPTWFVLLVGSAMNFAGYFMIWLAVTQKIARPAVW 111


>ref|XP_002523712.1| conserved hypothetical protein [Ricinus communis]
           gi|223537016|gb|EEF38652.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 558

 Score =  181 bits (459), Expect = 1e-43
 Identities = 85/105 (80%), Positives = 92/105 (87%)
 Frame = -1

Query: 317 FMVHVIRGRWFMMFASFVIMVGAGATYLFGTYSKAIKQTLGYTQTTLNLLGFFKDLGSNI 138
           F VHVI GRWF +FASF+IM GAGATYLFGTYSK IK TLGY Q TLNLLGFFKDLG+N+
Sbjct: 7   FAVHVINGRWFSVFASFLIMAGAGATYLFGTYSKDIKATLGYDQQTLNLLGFFKDLGANV 66

Query: 137 GVFSGLIAEVTPTWFVLLVGAATNFVGYFMIWLAVTGKIAKPKVW 3
           GV SGLIAEVTPTWFVLL+G+A NF GYFMIWL VTG+IAKP VW
Sbjct: 67  GVLSGLIAEVTPTWFVLLMGSAMNFTGYFMIWLTVTGRIAKPAVW 111


>ref|XP_003632273.1| PREDICTED: uncharacterized protein LOC100244770 [Vitis vinifera]
          Length = 588

 Score =  180 bits (457), Expect = 2e-43
 Identities = 85/109 (77%), Positives = 98/109 (89%)
 Frame = -1

Query: 329 EVIGFMVHVIRGRWFMMFASFVIMVGAGATYLFGTYSKAIKQTLGYTQTTLNLLGFFKDL 150
           EV  F VHVIRGRWF ++ASF+IMVGAGATYLFG YSK IK ++GY Q+TLNL+GFFKDL
Sbjct: 16  EVGRFAVHVIRGRWFSVYASFLIMVGAGATYLFGIYSKEIKSSMGYDQSTLNLIGFFKDL 75

Query: 149 GSNIGVFSGLIAEVTPTWFVLLVGAATNFVGYFMIWLAVTGKIAKPKVW 3
           G+N+GV +GLIAEVTPTWFVLLVG+A NF G+FMIWLAVTG+IAKPKVW
Sbjct: 76  GANVGVPAGLIAEVTPTWFVLLVGSALNFSGFFMIWLAVTGQIAKPKVW 124


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