BLASTX nr result

ID: Coptis23_contig00019868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019868
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853...   135   3e-30
ref|XP_002514989.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
emb|CBI27558.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_003631322.1| PREDICTED: uncharacterized protein LOC100853782 [Vitis vinifera]
          Length = 359

 Score =  135 bits (340), Expect = 3e-30
 Identities = 74/116 (63%), Positives = 81/116 (69%)
 Frame = +1

Query: 1   RSPISSRSSTPGRCPQGGQSTESYQTGLTSLGNRCEPVPFCRASGETSWTNREEDESTAS 180
           RSPISS SSTPGRC         YQTGL+S  +R E  P  R  G  S    + +ES A 
Sbjct: 181 RSPISSGSSTPGRC---------YQTGLSSTESRGEAAPVGRGHGRFS---SDGEESNAC 228

Query: 181 KMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVKIQAWENHEKRKAEM 348
           KM ENKN E A  PNPL+ RA AWDEAERAK++ARYKREEVKIQAWENHEKRKAEM
Sbjct: 229 KMPENKNSEHARKPNPLDTRATAWDEAERAKYLARYKREEVKIQAWENHEKRKAEM 284


>ref|XP_002514989.1| conserved hypothetical protein [Ricinus communis]
           gi|223546040|gb|EEF47543.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score =  126 bits (316), Expect = 2e-27
 Identities = 72/119 (60%), Positives = 81/119 (68%), Gaps = 3/119 (2%)
 Frame = +1

Query: 1   RSPISSRSSTPGRCPQGGQSTES-YQTGLTSLGNRCEPVPFCRASGETSWTNREE--DES 171
           RSPISS SSTP RC  G Q T+  YQ GL S  +R          GE S  +R    +E 
Sbjct: 174 RSPISSGSSTPVRCQHGLQCTDQGYQAGLASTESR---------GGEPSSASRGRHGEEP 224

Query: 172 TASKMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVKIQAWENHEKRKAEM 348
              KM ENK+L++A   NPLE+RA AWDEAERAK+MARYKREEVKIQAWENHEKRKAEM
Sbjct: 225 NGCKMSENKDLDEARNLNPLEMRATAWDEAERAKYMARYKREEVKIQAWENHEKRKAEM 283


>ref|XP_002312638.1| predicted protein [Populus trichocarpa] gi|222852458|gb|EEE90005.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  120 bits (300), Expect = 2e-25
 Identities = 68/116 (58%), Positives = 75/116 (64%)
 Frame = +1

Query: 1   RSPISSRSSTPGRCPQGGQSTESYQTGLTSLGNRCEPVPFCRASGETSWTNREEDESTAS 180
           RSPISS SSTP R   G Q  E YQTGL    +R E        G  S T     E   S
Sbjct: 182 RSPISSGSSTPVRGQHGLQGNEGYQTGLAVTESRGE------TPGVVSATRHYGQEFNGS 235

Query: 181 KMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVKIQAWENHEKRKAEM 348
           ++ EN + +QA   N LE RA+AWDEAERAK+MARYKREEVKIQAWENHEKRKAEM
Sbjct: 236 RIPENMDSDQARKMNALEARAMAWDEAERAKYMARYKREEVKIQAWENHEKRKAEM 291


>emb|CBI27558.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = +1

Query: 163 DESTASKMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVKIQAWENHEKRKA 342
           +ES A KM ENKN E A  PNPL+ RA AWDEAERAK++ARYKREEVKIQAWENHEKRKA
Sbjct: 38  EESNACKMPENKNSEHARKPNPLDTRATAWDEAERAKYLARYKREEVKIQAWENHEKRKA 97

Query: 343 EM 348
           EM
Sbjct: 98  EM 99


>ref|XP_002315625.1| predicted protein [Populus trichocarpa] gi|222864665|gb|EEF01796.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/116 (49%), Positives = 68/116 (58%)
 Frame = +1

Query: 1   RSPISSRSSTPGRCPQGGQSTESYQTGLTSLGNRCEPVPFCRASGETSWTNREEDESTAS 180
           RSP+SS S TP R             GL   G        C   G ++  N    ES  S
Sbjct: 179 RSPVSSGSCTPVR-------------GLNGRGEAS-----CAPRGVSATRNYYGQESNGS 220

Query: 181 KMYENKNLEQATTPNPLEVRAIAWDEAERAKFMARYKREEVKIQAWENHEKRKAEM 348
           +++EN   +Q    + LE RA+AWD+AERAK+MARYKREEVKIQAWENHEKRKAEM
Sbjct: 221 RIHENMESDQVRKVSTLETRAMAWDDAERAKYMARYKREEVKIQAWENHEKRKAEM 276


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