BLASTX nr result

ID: Coptis23_contig00019858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019858
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534097.1| conserved hypothetical protein [Ricinus comm...   124   2e-26
ref|XP_002313142.1| predicted protein [Populus trichocarpa] gi|2...   120   4e-25
ref|XP_002285342.1| PREDICTED: uncharacterized protein LOC100243...   117   4e-24
emb|CAN60918.1| hypothetical protein VITISV_019333 [Vitis vinifera]   117   4e-24
gb|ACF86521.1| unknown [Zea mays] gi|195615330|gb|ACG29495.1| hy...   106   7e-21

>ref|XP_002534097.1| conserved hypothetical protein [Ricinus communis]
           gi|223525852|gb|EEF28285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  124 bits (312), Expect = 2e-26
 Identities = 66/110 (60%), Positives = 76/110 (69%)
 Frame = -2

Query: 689 KFDKKVQFYTKVRDTVASLRAKTEIGXXXXXXXXXXXXKAYDLSSLNEVLPELKDPGQRH 510
           KF+KKVQFYTKVRDT+ASL A+  I             KAYDLSSL E LPEL+ P Q  
Sbjct: 15  KFEKKVQFYTKVRDTIASLNAQKSITKKKKLRSREKKLKAYDLSSLTEFLPELRSPQQPT 74

Query: 509 DLTNLKLNSKSRQKLVEKEGRQLKAVLSNPVFQLDPLAAIHQHLERTQPV 360
               LKLN KSRQKL+ KEG+QL AVL++P F+ DPL AIH HL+ TQPV
Sbjct: 75  TAAELKLNCKSRQKLILKEGKQLSAVLNHPAFRSDPLGAIHHHLQSTQPV 124


>ref|XP_002313142.1| predicted protein [Populus trichocarpa] gi|222849550|gb|EEE87097.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  120 bits (302), Expect = 4e-25
 Identities = 65/111 (58%), Positives = 74/111 (66%)
 Frame = -2

Query: 692 RKFDKKVQFYTKVRDTVASLRAKTEIGXXXXXXXXXXXXKAYDLSSLNEVLPELKDPGQR 513
           RKF+KKVQFY+KVRD VA L A+  I             KAYDLS+L E LPELK P Q 
Sbjct: 14  RKFEKKVQFYSKVRDAVAVLTAQKSITKKKKLRSRQKKLKAYDLSTLTEFLPELKSPQQS 73

Query: 512 HDLTNLKLNSKSRQKLVEKEGRQLKAVLSNPVFQLDPLAAIHQHLERTQPV 360
                 KLNSKSRQKL+ KEG+QL  VL++P FQ DPL +IHQHL  TQPV
Sbjct: 74  KPTAEFKLNSKSRQKLILKEGKQLSMVLNHPAFQADPLGSIHQHLLSTQPV 124


>ref|XP_002285342.1| PREDICTED: uncharacterized protein LOC100243540 [Vitis vinifera]
           gi|296090453|emb|CBI40272.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score =  117 bits (293), Expect = 4e-24
 Identities = 63/109 (57%), Positives = 77/109 (70%)
 Frame = -2

Query: 689 KFDKKVQFYTKVRDTVASLRAKTEIGXXXXXXXXXXXXKAYDLSSLNEVLPELKDPGQRH 510
           KF+KK++FY+KVRDTVASL AK  I             KAY+LSSL+EVLP+LK   Q  
Sbjct: 16  KFEKKLKFYSKVRDTVASLSAKKGINKKKKLRSRQKKLKAYNLSSLSEVLPDLKAQEQPA 75

Query: 509 DLTNLKLNSKSRQKLVEKEGRQLKAVLSNPVFQLDPLAAIHQHLERTQP 363
            +T  K+N KSRQKL+ KEG QL+ VL++P+F  DPLAAIHQHL  TQP
Sbjct: 76  PVTEFKVNCKSRQKLIMKEGDQLRTVLNHPIFHSDPLAAIHQHLLSTQP 124


>emb|CAN60918.1| hypothetical protein VITISV_019333 [Vitis vinifera]
          Length = 156

 Score =  117 bits (293), Expect = 4e-24
 Identities = 63/109 (57%), Positives = 77/109 (70%)
 Frame = -2

Query: 689 KFDKKVQFYTKVRDTVASLRAKTEIGXXXXXXXXXXXXKAYDLSSLNEVLPELKDPGQRH 510
           KF+KK++FY+KVRDTVASL AK  I             KAY+LSSL+EVLP+LK   Q  
Sbjct: 16  KFEKKLKFYSKVRDTVASLSAKKGINKKKKLRSRQKKLKAYNLSSLSEVLPDLKAQEQPA 75

Query: 509 DLTNLKLNSKSRQKLVEKEGRQLKAVLSNPVFQLDPLAAIHQHLERTQP 363
            +T  K+N KSRQKL+ KEG QL+ VL++P+F  DPLAAIHQHL  TQP
Sbjct: 76  PVTEFKVNCKSRQKLIMKEGDQLRTVLNHPIFHSDPLAAIHQHLLSTQP 124


>gb|ACF86521.1| unknown [Zea mays] gi|195615330|gb|ACG29495.1| hypothetical protein
           [Zea mays] gi|414877727|tpg|DAA54858.1| TPA:
           hypothetical protein ZEAMMB73_037598 [Zea mays]
          Length = 157

 Score =  106 bits (265), Expect = 7e-21
 Identities = 60/110 (54%), Positives = 69/110 (62%)
 Frame = -2

Query: 692 RKFDKKVQFYTKVRDTVASLRAKTEIGXXXXXXXXXXXXKAYDLSSLNEVLPELKDPGQR 513
           +K +KK+ FYTKV+D V SL AK  +             KAYDLS+L+E LPE   P Q+
Sbjct: 14  QKLEKKISFYTKVKDAVTSLNAKKTVSKKNKQSRRQKKLKAYDLSALSEFLPEPAAPEQK 73

Query: 512 HDLTNLKLNSKSRQKLVEKEGRQLKAVLSNPVFQLDPLAAIHQHLERTQP 363
              T  KLN KSRQ LV +E   LKAVL NP FQLDP AAIHQHL  TQP
Sbjct: 74  ---TEAKLNCKSRQTLVVQESAHLKAVLDNPQFQLDPFAAIHQHLLATQP 120


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