BLASTX nr result

ID: Coptis23_contig00019848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019848
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527476.1| conserved hypothetical protein [Ricinus comm...    99   5e-19
ref|XP_002313154.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002298754.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002527475.1| conserved hypothetical protein [Ricinus comm...    85   5e-15
ref|NP_195152.2| alpha-L-fucosidase 2 [Arabidopsis thaliana] gi|...    84   1e-14

>ref|XP_002527476.1| conserved hypothetical protein [Ricinus communis]
           gi|223533116|gb|EEF34874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 849

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/95 (55%), Positives = 66/95 (69%)
 Frame = +2

Query: 2   RKDPTTQCLNALSSVRKTLYSDLYAHHLDDYQKLFHRVSLQLSKSSKNDKIDKFYGMEKH 181
           +KDPT+ CL+AL  V+   Y+DLYA HLDDYQ LFHRVSL+LSKSSK+   +    M+K 
Sbjct: 295 KKDPTSACLHALDLVKNLSYTDLYARHLDDYQTLFHRVSLRLSKSSKSILGNGPLNMKKF 354

Query: 182 KSCTIDSYRDQISRDLVSTAERVKSFKVDEDPSLV 286
            S       ++   D +STAERVKSF+ DEDPSLV
Sbjct: 355 LSFKNYLSLNESKDDTISTAERVKSFRTDEDPSLV 389


>ref|XP_002313154.1| predicted protein [Populus trichocarpa] gi|222849562|gb|EEE87109.1|
           predicted protein [Populus trichocarpa]
          Length = 803

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/95 (55%), Positives = 59/95 (62%)
 Frame = +2

Query: 2   RKDPTTQCLNALSSVRKTLYSDLYAHHLDDYQKLFHRVSLQLSKSSKNDKIDKFYGMEKH 181
           +KDPT+  L+AL S+    Y+DLYAHHLDDYQ LFHRVSLQLSKSSK    D        
Sbjct: 271 KKDPTSDSLSALKSINNLSYTDLYAHHLDDYQSLFHRVSLQLSKSSKRRSED-------- 322

Query: 182 KSCTIDSYRDQISRDLVSTAERVKSFKVDEDPSLV 286
                         + VSTAERVKSFK DEDPSLV
Sbjct: 323 --------------NTVSTAERVKSFKTDEDPSLV 343


>ref|XP_002298754.1| predicted protein [Populus trichocarpa] gi|222846012|gb|EEE83559.1|
           predicted protein [Populus trichocarpa]
          Length = 808

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/95 (54%), Positives = 62/95 (65%)
 Frame = +2

Query: 2   RKDPTTQCLNALSSVRKTLYSDLYAHHLDDYQKLFHRVSLQLSKSSKNDKIDKFYGMEKH 181
           +K+PT+  L+ L S+    Y DLYAHHLDDYQ LFHRVSLQLSKSSKN  I         
Sbjct: 270 KKNPTSDSLSVLKSIGNLSYVDLYAHHLDDYQSLFHRVSLQLSKSSKNSDI--------- 320

Query: 182 KSCTIDSYRDQISRDLVSTAERVKSFKVDEDPSLV 286
              +++   D    D VSTAERVK+F+ DEDPSLV
Sbjct: 321 ---SLNGSED----DTVSTAERVKAFQTDEDPSLV 348


>ref|XP_002527475.1| conserved hypothetical protein [Ricinus communis]
           gi|223533115|gb|EEF34873.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 840

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/95 (50%), Positives = 56/95 (58%)
 Frame = +2

Query: 2   RKDPTTQCLNALSSVRKTLYSDLYAHHLDDYQKLFHRVSLQLSKSSKNDKIDKFYGMEKH 181
           +KDPT++ L AL ++    YSDLYA HL DYQKLFHRVS QL KSS     D+       
Sbjct: 283 KKDPTSESLRALKAITNLSYSDLYARHLHDYQKLFHRVSFQLWKSSNRIVGDESQLTNNL 342

Query: 182 KSCTIDSYRDQISRDLVSTAERVKSFKVDEDPSLV 286
                  Y   I  D V T ER+KSF+ DEDPSLV
Sbjct: 343 IPSANALYVKGIKDDAVPTVERIKSFQSDEDPSLV 377


>ref|NP_195152.2| alpha-L-fucosidase 2 [Arabidopsis thaliana]
           gi|75245768|sp|Q8L7W8.1|FUCO2_ARATH RecName:
           Full=Alpha-L-fucosidase 2; AltName:
           Full=Alpha-1,2-fucosidase 2; AltName:
           Full=Alpha-L-fucoside fucohydrolase 2; Flags: Precursor
           gi|21928117|gb|AAM78086.1| AT4g34260/F10M10_30
           [Arabidopsis thaliana] gi|27363438|gb|AAO11638.1|
           At4g34260/F10M10_30 [Arabidopsis thaliana]
           gi|332660949|gb|AEE86349.1| alpha-L-fucosidase 2
           [Arabidopsis thaliana]
          Length = 843

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/93 (49%), Positives = 56/93 (60%)
 Frame = +2

Query: 8   DPTTQCLNALSSVRKTLYSDLYAHHLDDYQKLFHRVSLQLSKSSKNDKIDKFYGMEKHKS 187
           DP  +C+N +SSV+K  YSDLYA HL DYQKLF+RVSL LS SS N+ +           
Sbjct: 320 DPAKECVNRISSVQKYSYSDLYARHLGDYQKLFNRVSLHLSGSSTNETV----------- 368

Query: 188 CTIDSYRDQISRDLVSTAERVKSFKVDEDPSLV 286
                      +   STAERV+SFK D+DPSLV
Sbjct: 369 -----------QQATSTAERVRSFKTDQDPSLV 390


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