BLASTX nr result

ID: Coptis23_contig00019844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019844
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27547.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...    80   2e-13
ref|XP_002312645.1| multidrug resistance protein ABC transporter...    79   4e-13
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    78   8e-13
ref|XP_002315633.1| multidrug resistance protein ABC transporter...    77   1e-12

>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -2

Query: 362  ITVAHRIPTVIDNDLVLLLEEGKIVEYGSPDVLLKDHSSAFSKLVREF 219
            ITVAHRIPTVIDNDLVL+L+EGK+VEY SP  LLKD SSAFSKLV EF
Sbjct: 1306 ITVAHRIPTVIDNDLVLVLDEGKVVEYDSPPQLLKDSSSAFSKLVMEF 1353


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -2

Query: 362  ITVAHRIPTVIDNDLVLLLEEGKIVEYGSPDVLLKDHSSAFSKLVREF 219
            ITVAHRIPTVIDNDLVL+L+EGK+VEY SP  LLKD SSAFSKLV EF
Sbjct: 1405 ITVAHRIPTVIDNDLVLVLDEGKVVEYDSPPQLLKDSSSAFSKLVMEF 1452


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/50 (76%), Positives = 46/50 (92%)
 Frame = -2

Query: 362  ITVAHRIPTVIDNDLVLLLEEGKIVEYGSPDVLLKDHSSAFSKLVREFVK 213
            ITVAHRIPTVIDNDL+L+LE+GK+VEY SP  LLKD+SS+FSKLV EF++
Sbjct: 1310 ITVAHRIPTVIDNDLILVLEDGKVVEYDSPVKLLKDNSSSFSKLVIEFLR 1359


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = -2

Query: 362  ITVAHRIPTVIDNDLVLLLEEGKIVEYGSPDVLLKDHSSAFSKLVREFVK 213
            ITVAHRIPTVIDNDLVL+L+EGK++EY  P  LLKD SS+FSKLV EF++
Sbjct: 1406 ITVAHRIPTVIDNDLVLVLDEGKVIEYDCPGQLLKDSSSSFSKLVAEFLR 1455


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = -2

Query: 362  ITVAHRIPTVIDNDLVLLLEEGKIVEYGSPDVLLKDHSSAFSKLVREFVK 213
            ITVAHRIPTVIDNDLVL+L++GK+VEY SP  LL+D+SS+FSKLV EF++
Sbjct: 990  ITVAHRIPTVIDNDLVLVLDDGKVVEYDSPVKLLEDNSSSFSKLVTEFLR 1039


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