BLASTX nr result

ID: Coptis23_contig00019834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019834
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15799.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine...   141   6e-32
ref|XP_002533344.1| protein with unknown function [Ricinus commu...   132   4e-29
ref|XP_002870890.1| ATP binding protein [Arabidopsis lyrata subs...   127   7e-28
ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28

>emb|CBI15799.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/85 (75%), Positives = 72/85 (84%)
 Frame = +1

Query: 91  ITDPAEVSALEAIKGSLKDPRNFLRNWNQGDPCTSNWTGVSCFNTTENDGYLHVSELHLL 270
           +TDP EV+AL AIK SL+DP N L NWN+GDPCTS WTGV CFNTT ND YLHV EL LL
Sbjct: 38  VTDPVEVTALRAIKESLEDPMNNLTNWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQLL 97

Query: 271 NMNLSGSLSPELGKFSYMKILDFMW 345
           NM+LSG+LSPELG+ SYM+ILDFMW
Sbjct: 98  NMHLSGTLSPELGRLSYMQILDFMW 122


>ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g06840-like [Vitis vinifera]
          Length = 959

 Score =  141 bits (355), Expect = 6e-32
 Identities = 64/85 (75%), Positives = 72/85 (84%)
 Frame = +1

Query: 91  ITDPAEVSALEAIKGSLKDPRNFLRNWNQGDPCTSNWTGVSCFNTTENDGYLHVSELHLL 270
           +TDP EV+AL AIK SL+DP N L NWN+GDPCTS WTGV CFNTT ND YLHV EL LL
Sbjct: 38  VTDPVEVTALRAIKESLEDPMNNLTNWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQLL 97

Query: 271 NMNLSGSLSPELGKFSYMKILDFMW 345
           NM+LSG+LSPELG+ SYM+ILDFMW
Sbjct: 98  NMHLSGTLSPELGRLSYMQILDFMW 122


>ref|XP_002533344.1| protein with unknown function [Ricinus communis]
           gi|223526824|gb|EEF29043.1| protein with unknown
           function [Ricinus communis]
          Length = 844

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/85 (72%), Positives = 66/85 (77%)
 Frame = +1

Query: 91  ITDPAEVSALEAIKGSLKDPRNFLRNWNQGDPCTSNWTGVSCFNTTENDGYLHVSELHLL 270
           IT P EV AL  +K SL D    L NWN+GDPCTSNWTGV CFN T +DGYLHV EL LL
Sbjct: 30  ITSPIEVKALREVKKSLVDINKNLSNWNRGDPCTSNWTGVLCFNATMDDGYLHVRELQLL 89

Query: 271 NMNLSGSLSPELGKFSYMKILDFMW 345
           NMNLSG+LSP LG FSYMKILDFMW
Sbjct: 90  NMNLSGTLSPSLGLFSYMKILDFMW 114


>ref|XP_002870890.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316727|gb|EFH47149.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 951

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = +1

Query: 88  QITDPAEVSALEAIKGSLKDPRNFLRNWNQGDPCTSNWTGVSCFNTTENDGYLHVSELHL 267
           Q T P+EVSAL ++K SL DP+++LRNWN+GDPC SNWTGV CFN    D YLHV EL L
Sbjct: 26  QRTHPSEVSALRSVKRSLIDPKDYLRNWNRGDPCRSNWTGVICFNEIGTDDYLHVRELLL 85

Query: 268 LNMNLSGSLSPELGKFSYMKILDFMW 345
           +NMNLSGSLSPEL K ++++ILDFMW
Sbjct: 86  MNMNLSGSLSPELRKLAHLEILDFMW 111


>ref|XP_002323098.1| predicted protein [Populus trichocarpa] gi|222867728|gb|EEF04859.1|
           predicted protein [Populus trichocarpa]
          Length = 959

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/86 (65%), Positives = 71/86 (82%)
 Frame = +1

Query: 88  QITDPAEVSALEAIKGSLKDPRNFLRNWNQGDPCTSNWTGVSCFNTTENDGYLHVSELHL 267
           Q+T+P+EV+AL A+K +L DP   L NWN+GDPCTSNWTGV C++ T  DGYLHV EL+L
Sbjct: 25  QVTNPSEVNALLAVKNNLIDPMKQLSNWNKGDPCTSNWTGVFCYDATGTDGYLHVRELYL 84

Query: 268 LNMNLSGSLSPELGKFSYMKILDFMW 345
           LN+NLSG+L+PELG+ S + ILDFMW
Sbjct: 85  LNLNLSGNLAPELGQLSQLAILDFMW 110


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