BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019830
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   208   4e-52
gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thal...   199   2e-49
ref|NP_177860.2| pentatricopeptide repeat-containing protein [Ar...   199   2e-49
ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
ref|XP_002889139.1| pentatricopeptide repeat-containing protein ...   195   4e-48

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  208 bits (530), Expect = 4e-52
 Identities = 100/153 (65%), Positives = 128/153 (83%)
 Frame = -1

Query: 464 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEVLSKFENAGMQSYRF 285
           S + +K+  D  K++ KIM+S PKL L++ L+ESGIRVS  +VE VL +FENAGM +Y+F
Sbjct: 4   SGEIIKETADPTKRICKIMISCPKLELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQF 63

Query: 284 FEWAGKQRSYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCLIMRKYAR 105
           FEWAGKQR+YTHS+ +YHT+I SLAKIRQY++MWD+V+ MRS  +LNVETFC+IMRKYAR
Sbjct: 64  FEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYAR 123

Query: 104 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSEI 6
           +Q+V EA+YTFN+MEKY V  NLAAFNSLLS +
Sbjct: 124 SQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSAL 156


>gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
          Length = 481

 Score =  199 bits (507), Expect = 2e-49
 Identities = 93/153 (60%), Positives = 125/153 (81%)
 Frame = -1

Query: 464 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEVLSKFENAGMQSYRF 285
           S++ ++   D  K +SK++MSSP+L L+S L++SG+RVS E+VE+VL++F NAG+ +YRF
Sbjct: 25  SSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRF 84

Query: 284 FEWAGKQRSYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCLIMRKYAR 105
           F+W+ KQR Y HSV +YH +I S AKIRQYKLMWD++++MR K +LNVETFC++MRKYAR
Sbjct: 85  FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYAR 144

Query: 104 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSEI 6
           AQ+VDEAIY FNVMEKY +  NL AFN LLS +
Sbjct: 145 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSAL 177


>ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77360, mitochondrial; Flags: Precursor
           gi|332197848|gb|AEE35969.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  199 bits (507), Expect = 2e-49
 Identities = 93/153 (60%), Positives = 125/153 (81%)
 Frame = -1

Query: 464 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEVLSKFENAGMQSYRF 285
           S++ ++   D  K +SK++MSSP+L L+S L++SG+RVS E+VE+VL++F NAG+ +YRF
Sbjct: 61  SSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRF 120

Query: 284 FEWAGKQRSYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCLIMRKYAR 105
           F+W+ KQR Y HSV +YH +I S AKIRQYKLMWD++++MR K +LNVETFC++MRKYAR
Sbjct: 121 FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYAR 180

Query: 104 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSEI 6
           AQ+VDEAIY FNVMEKY +  NL AFN LLS +
Sbjct: 181 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSAL 213


>ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 461

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/153 (60%), Positives = 125/153 (81%)
 Frame = -1

Query: 464 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEVLSKFENAGMQSYRF 285
           S   ++   +A +++ K+MM+ P L L++ LN++G+RVS +LVE VL +FENAGM ++RF
Sbjct: 5   SEAMIQDVGEASERVCKVMMTCPTLGLDTALNQTGVRVSPDLVENVLKRFENAGMPAFRF 64

Query: 284 FEWAGKQRSYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCLIMRKYAR 105
           FEWA KQR Y+HS+ +YH +I SLAKIRQY+++WD+VS+MR KG+LNVETFC++MRKYAR
Sbjct: 65  FEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYAR 124

Query: 104 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSEI 6
           A +VDEA+YTFNVM+KY V  NLAAFN LLS +
Sbjct: 125 ANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSAL 157


>ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334980|gb|EFH65398.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 482

 Score =  195 bits (496), Expect = 4e-48
 Identities = 91/153 (59%), Positives = 123/153 (80%)
 Frame = -1

Query: 464 STKTLKQFPDAYKKLSKIMMSSPKLSLESILNESGIRVSTELVEEVLSKFENAGMQSYRF 285
           S++ ++   D  K +SK++MSSP+L ++S L++SG+RVS E+VE+VL +F NAG+ +YRF
Sbjct: 26  SSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRF 85

Query: 284 FEWAGKQRSYTHSVISYHTIIGSLAKIRQYKLMWDVVSSMRSKGVLNVETFCLIMRKYAR 105
           F+W+ KQR Y HSV +YH +I S AKIRQYKLMWD++++M  K +LNVETFC++MRKYAR
Sbjct: 86  FQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKMLNVETFCIVMRKYAR 145

Query: 104 AQRVDEAIYTFNVMEKYGVQQNLAAFNSLLSEI 6
           AQ+VDEAIY FNVMEKY +  NL AFN LLS +
Sbjct: 146 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSAL 178