BLASTX nr result

ID: Coptis23_contig00019829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019829
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA36225.1| transposase [Ipomoea purpurea]                        110   1e-22
ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago trunc...   107   8e-22
ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago trunc...   106   2e-21
ref|XP_002338788.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>dbj|BAA36225.1| transposase [Ipomoea purpurea]
          Length = 808

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/86 (63%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   VETRKINIYYLIDRLIRLVLTLPVSTATTERAFSAMKLLKTRLRNKMGDEFLADCMTIYI 180
           V+TRK NIY L+ R++ LVLTLPVSTATTER+FSAM ++KT LRNKM DEFL+DC+ +YI
Sbjct: 722 VKTRKSNIYPLVFRVVTLVLTLPVSTATTERSFSAMNIVKTTLRNKMEDEFLSDCLLVYI 781

Query: 181 EREFAKEVDLDAIIDVF-DKNPRRSK 255
           E++ AK+  +D+IID F D   RRSK
Sbjct: 782 EKQIAKQFSIDSIIDAFRDMQERRSK 807


>ref|XP_003593126.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355482174|gb|AES63377.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 754

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = +1

Query: 7   TRKINIYYLIDRLIRLVLTLPVSTATTERAFSAMKLLKTRLRNKMGDEFLADCMTIYIER 186
           TRK + +YL+D LIRL+LTLPVSTATTER+FSAMKL+KTRLRNKM DEFLAD M +YIE+
Sbjct: 670 TRKADTHYLVDCLIRLILTLPVSTATTERSFSAMKLIKTRLRNKMEDEFLADSMMLYIEK 729

Query: 187 EFAKEVDLDAIIDVFDKNPRRS 252
           E A +   D+IID F     R+
Sbjct: 730 EIADQFSTDSIIDEFKSKKDRT 751


>ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|222869621|gb|EEF06752.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/82 (69%), Positives = 64/82 (78%)
 Frame = +1

Query: 4   ETRKINIYYLIDRLIRLVLTLPVSTATTERAFSAMKLLKTRLRNKMGDEFLADCMTIYIE 183
           ET K   Y+LIDRLIRLVLTLPVSTATTERAFSAMK +KT LRNKM +EFLAD M IYIE
Sbjct: 36  ETNKSQHYHLIDRLIRLVLTLPVSTATTERAFSAMKHVKTVLRNKMEEEFLADSMMIYIE 95

Query: 184 REFAKEVDLDAIIDVFDKNPRR 249
           RE  +++D D+IID F     R
Sbjct: 96  RELVEDIDSDSIIDEFYSTKHR 117


>ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355489146|gb|AES70349.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 795

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = +1

Query: 7   TRKINIYYLIDRLIRLVLTLPVSTATTERAFSAMKLLKTRLRNKMGDEFLADCMTIYIER 186
           T K + +YL+DRLIRL+LTLPVSTATTER+FS MKL+KTRLRNKM DEFLAD M +YIE+
Sbjct: 711 TGKADTHYLVDRLIRLILTLPVSTATTERSFSTMKLIKTRLRNKMEDEFLADSMMLYIEK 770

Query: 187 EFAKEVDLDAIIDVFDKNPRRS 252
           E A +   D+IID F     R+
Sbjct: 771 EIADQFSTDSIIDEFKSKKDRT 792


>ref|XP_002338788.1| predicted protein [Populus trichocarpa] gi|222873463|gb|EEF10594.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/87 (64%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = +1

Query: 1   VETRKINIYYLIDRLIRLVLTLPVSTATTERAFSAMKLLKTRLRNKMGDEFLADCMTIYI 180
           VET K  IY LIDRLIRL+LTLPVSTATTERAFSAMK++KTRLRN+M D+FLA+ + +YI
Sbjct: 123 VETEKSTIYPLIDRLIRLILTLPVSTATTERAFSAMKIVKTRLRNRMEDDFLANYLIVYI 182

Query: 181 EREFAKEVDLDAIIDVF-DKNPRRSKL 258
           E+E A+   +D IID F     RR++L
Sbjct: 183 EKEIAERFPIDMIIDDFYSMKERRAQL 209


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