BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019827
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...   459   e-126
emb|CBI40154.3| unnamed protein product [Vitis vinifera]              430   e-118
emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]   421   e-115
ref|XP_002303924.1| chromatin remodeling complex subunit [Populu...   416   e-114
ref|XP_002513066.1| conserved hypothetical protein [Ricinus comm...   411   e-112

>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score =  459 bits (1180), Expect = e-126
 Identities = 242/448 (54%), Positives = 305/448 (68%), Gaps = 8/448 (1%)
 Frame = -3

Query: 1331 ESGVSXXXXKRGRYGVVDEKMSVVQQLWDLKINKCIEIVARLVSVSSRGDGNGDXXXXXX 1152
            +SG      ++   G+V   +SVV+Q+  L ++KC++IVAR+V V       G+      
Sbjct: 119  DSGECSRRKRKRGIGLVHGSISVVRQIHALVVHKCVKIVARVVRVC------GEARAVVL 172

Query: 1151 XXXXXXXXLWSGWQFPKSKAMAASSLFRHLSCNWDQRKVILSNSEQYFKLMHEDDQSIWN 972
                    LWSGWQFP+S A  A +LFRHLSC+W++R  +L N E+Y+K    D++S+WN
Sbjct: 173  VDVYLPIELWSGWQFPRS-ASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWN 231

Query: 971  HSDCHVLECKIHHNVTGSCKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWD 792
             SDCHVL CK+H N     KK+LFELHEIFKSLP VA +G+  S+R++    S  SGIW+
Sbjct: 232  LSDCHVLGCKLHCNALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWE 291

Query: 791  LTDDTLMNVLTALGPMDLFRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRERN 612
            ++DD L+N+LTAL PMDL R+SATC HLRSL+ SIMPCMKLKLFPHQ  AV+WML+RERN
Sbjct: 292  VSDDVLINILTALAPMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERN 351

Query: 611  AEVLAHPLYMDFSTEDGFNFFIHAVSGEVVTGIAPTIVDFQGGMFCDEPGLGKTITALSL 432
            AE+L HPL++DF TEDGF F+I+ V+GE+VTG+ P I DF+GGMFCDEPGLGKTITALSL
Sbjct: 352  AEILPHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSL 411

Query: 431  ILKTQGVLADPPDGVEVIWCTHNNDQRCGYYELSADNFNPGDVMPSWKRFMAQNERRGQL 252
            ILKTQG  ADPPDGV+VIWCTHN+DQRCGYYEL++DN +  + M S KR + Q  RRG L
Sbjct: 412  ILKTQGTWADPPDGVQVIWCTHNSDQRCGYYELTSDNVSV-NKMFSGKRILGQVARRGWL 470

Query: 251  CSDECTPV--------AXXXXXXXXXXXXXXXXSCPSKLGITSSTTSPSHATKLVTRCTG 96
              D+ TP+                         SCP K+ I S TT  S     V RCT 
Sbjct: 471  SLDKPTPMENRKYSSPERTRLVIPGVQIAGSTDSCPGKV-IKSPTTVRSMPATRVVRCTR 529

Query: 95   SLSCVPRNLLGSYEGTSGFAIGKKLRKN 12
            SLS V RNL+ +YE  SGF   +KL+KN
Sbjct: 530  SLSRVKRNLVYAYEEASGFGKERKLKKN 557


>emb|CBI40154.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  430 bits (1106), Expect = e-118
 Identities = 226/430 (52%), Positives = 282/430 (65%)
 Frame = -3

Query: 1331 ESGVSXXXXKRGRYGVVDEKMSVVQQLWDLKINKCIEIVARLVSVSSRGDGNGDXXXXXX 1152
            +SG      ++   G+V   +SVV+Q+  L ++KC++IVAR+V V       G+      
Sbjct: 67   DSGECSRRKRKRGIGLVHGSISVVRQIHALVVHKCVKIVARVVRVC------GEARAVVL 120

Query: 1151 XXXXXXXXLWSGWQFPKSKAMAASSLFRHLSCNWDQRKVILSNSEQYFKLMHEDDQSIWN 972
                    LWSGWQFP+S A  A +LFRHLSC+W++R  +L N E+Y+K    D++S+WN
Sbjct: 121  VDVYLPIELWSGWQFPRS-ASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWN 179

Query: 971  HSDCHVLECKIHHNVTGSCKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWD 792
             SDCHVL CK+H N     KK+LFELHEIFKSLP VA +G+  S+R++    S  SGIW+
Sbjct: 180  LSDCHVLGCKLHCNALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWE 239

Query: 791  LTDDTLMNVLTALGPMDLFRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRERN 612
            ++DD L+N+LTAL PMDL R+SATC HLRSL+ SIMPCMKLKLFPHQ  AV+WML+RERN
Sbjct: 240  VSDDVLINILTALAPMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERN 299

Query: 611  AEVLAHPLYMDFSTEDGFNFFIHAVSGEVVTGIAPTIVDFQGGMFCDEPGLGKTITALSL 432
            AE+L HPL++DF TEDGF F+I+ V+GE+VTG+ P I DF+GGMFCDEPGLGKTITALSL
Sbjct: 300  AEILPHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSL 359

Query: 431  ILKTQGVLADPPDGVEVIWCTHNNDQRCGYYELSADNFNPGDVMPSWKRFMAQNERRGQL 252
            ILKTQG  ADPPDGV+VIWCTHN+DQRCGYYEL++DN    D                  
Sbjct: 360  ILKTQGTWADPPDGVQVIWCTHNSDQRCGYYELTSDNVRSTD------------------ 401

Query: 251  CSDECTPVAXXXXXXXXXXXXXXXXSCPSKLGITSSTTSPSHATKLVTRCTGSLSCVPRN 72
                                     SCP K+ I S TT  S     V RCT SLS V RN
Sbjct: 402  -------------------------SCPGKV-IKSPTTVRSMPATRVVRCTRSLSRVKRN 435

Query: 71   LLGSYEGTSG 42
            L+ +YE  SG
Sbjct: 436  LVYAYEEASG 445


>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score =  421 bits (1083), Expect = e-115
 Identities = 211/365 (57%), Positives = 268/365 (73%)
 Frame = -3

Query: 1331 ESGVSXXXXKRGRYGVVDEKMSVVQQLWDLKINKCIEIVARLVSVSSRGDGNGDXXXXXX 1152
            +SG      ++   G+V   +SVV+Q+  L ++KC++IVAR+V V       G+      
Sbjct: 67   DSGECSRRKRKRGIGLVHGSISVVRQIHALVVHKCVKIVARVVRVC------GEARAVVL 120

Query: 1151 XXXXXXXXLWSGWQFPKSKAMAASSLFRHLSCNWDQRKVILSNSEQYFKLMHEDDQSIWN 972
                    LWSGWQFP+S A  A +LFRHLSC+W++R  +L N E+Y+K    D++S+WN
Sbjct: 121  VDVYLPIELWSGWQFPRS-ASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWN 179

Query: 971  HSDCHVLECKIHHNVTGSCKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWD 792
             SDCHVL CK+H N     KK+LFELHEIFKSLP VA +G+  S+R++    S  SGIW+
Sbjct: 180  LSDCHVLGCKLHCNALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWE 239

Query: 791  LTDDTLMNVLTALGPMDLFRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRERN 612
            ++DD L+N+LTAL PMDL R+SATC HLRSL+ SIMPCMKLKLFPHQ  AV+WML+RERN
Sbjct: 240  VSDDVLINILTALAPMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERN 299

Query: 611  AEVLAHPLYMDFSTEDGFNFFIHAVSGEVVTGIAPTIVDFQGGMFCDEPGLGKTITALSL 432
            AE+L HPL++DF TEDGF F+I+ V+GE+VTG+ P I DF+GGMFCDEPGLGKTITALSL
Sbjct: 300  AEILPHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSL 359

Query: 431  ILKTQGVLADPPDGVEVIWCTHNNDQRCGYYELSADNFNPGDVMPSWKRFMAQNERRGQL 252
            ILKTQG  ADPPDGV+VIWCTHN+DQRCGYYEL++DN +  + M S KR + Q   +G L
Sbjct: 360  ILKTQGTWADPPDGVQVIWCTHNSDQRCGYYELTSDNVSV-NKMFSGKRILGQGCSKG-L 417

Query: 251  CSDEC 237
            C D C
Sbjct: 418  C-DAC 421


>ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222841356|gb|EEE78903.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1333

 Score =  416 bits (1069), Expect = e-114
 Identities = 222/429 (51%), Positives = 283/429 (65%)
 Frame = -3

Query: 1289 GVVDEKMSVVQQLWDLKINKCIEIVARLVSVSSRGDGNGDXXXXXXXXXXXXXXLWSGWQ 1110
            G+V+  +SVV Q+  L ++KC++I+AR++ V+       +              +WSG Q
Sbjct: 113  GMVNGSVSVVHQIRALVMHKCVKILARVLHVAESEGEVVEVRVVVLVDVYLPVSVWSGGQ 172

Query: 1109 FPKSKAMAASSLFRHLSCNWDQRKVILSNSEQYFKLMHEDDQSIWNHSDCHVLECKIHHN 930
            FPKS  +A S LFRHLSC+W++R+ +L +  +YFK    D +SIWN S CHVL C +H +
Sbjct: 173  FPKSGPIAGS-LFRHLSCDWEKRRSMLVDGGEYFKNALGDHRSIWNLSGCHVLGCNLHCD 231

Query: 929  VTGSCKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMNVLTALG 750
            V  S  K+ FELHEIFK LP    + ++ S+R++    SL SGIWDLT D LM++L+ALG
Sbjct: 232  VPDSSSKKRFELHEIFKGLPSTENKEQYYSSRVKPADNSLESGIWDLTGDILMSILSALG 291

Query: 749  PMDLFRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRERNAEVLAHPLYMDFST 570
            P DL R++ATC HLRSL+ SIMPCMKLKLFPHQQ AV+WML+RERNA+VL HPLY + ST
Sbjct: 292  PKDLVRVAATCHHLRSLAVSIMPCMKLKLFPHQQAAVEWMLQRERNAQVLPHPLYTNLST 351

Query: 569  EDGFNFFIHAVSGEVVTGIAPTIVDFQGGMFCDEPGLGKTITALSLILKTQGVLADPPDG 390
            EDGF F +  VSGE++TG+APT+ DF GGMFCDEPGLGKTITALSLILKT+G +ADPPDG
Sbjct: 352  EDGFTFHVSTVSGEIITGVAPTVRDFHGGMFCDEPGLGKTITALSLILKTRGTVADPPDG 411

Query: 389  VEVIWCTHNNDQRCGYYELSADNFNPGDVMPSWKRFMAQNERRGQLCSDECTPVAXXXXX 210
            V++ WCTHN +QRCGYYE+   NF P +  P  KR M Q+ RRGQL  D+ T        
Sbjct: 412  VQITWCTHNGEQRCGYYEVDGRNFTPNNT-PLAKRVMNQSARRGQLSLDKST-----LMN 465

Query: 209  XXXXXXXXXXXSCPSKLGITSSTTSPSHATKLVTRCTGSLSCVPRNLLGSYEGTSGFAIG 30
                       SCP   G+ SS    S  T  V +    LS V RNLL  Y+ T  F+  
Sbjct: 466  DPGQQIEGFSNSCPVN-GMESSPAPSSDQTARVVQ----LSRVKRNLLHEYDETPVFS-N 519

Query: 29   KKLRKNVGN 3
            KK RK+  N
Sbjct: 520  KKKRKHRSN 528


>ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis]
            gi|223548077|gb|EEF49569.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1322

 Score =  411 bits (1057), Expect = e-112
 Identities = 224/440 (50%), Positives = 288/440 (65%), Gaps = 14/440 (3%)
 Frame = -3

Query: 1289 GVVDEKMSVVQQLWDLKINKCIEIVARLVSVS---SRGDGNGDXXXXXXXXXXXXXXLWS 1119
            G+V+  +SVV Q+  L +NKCI+I+AR++ V    S  +                  LW+
Sbjct: 96   GMVNGSLSVVNQIHALVVNKCIKIIARVLKVEEDYSNSNNKDARAVVVLVDVYLPIELWT 155

Query: 1118 GWQFPKSKAMAASSLFRHLSCNWDQRKVILSNSEQYFKLMHEDD---QSIWNHSDCHVLE 948
            GWQF K  + AA+ LFRHLS +W +R ++L +  +Y K    DD    SIWN SDCHV+ 
Sbjct: 156  GWQFTKCGSTAAA-LFRHLSYDWGKRSLLLVDGGEYCK----DDGGSMSIWNLSDCHVIG 210

Query: 947  CKIHHNVTGSCKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMN 768
            C++H +V  S KKR FEL+EIFK LP V    K  S+R++ +  +  SGIWDLTDD L+N
Sbjct: 211  CQLHCSVPDSTKKRRFELNEIFKGLPSVTNREKLYSSRVKPDDDTYESGIWDLTDDILIN 270

Query: 767  VLTALGPMDLFRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRERNAEVLAHPL 588
            +L+ LGPMDL R++ATC+HLR+L+ S+MP MKLKLFPHQ+ AV+WML+RER+  VL HPL
Sbjct: 271  ILSVLGPMDLIRVAATCQHLRTLAVSVMPSMKLKLFPHQEAAVEWMLQRERSTHVLPHPL 330

Query: 587  YMDFSTEDGFNFFIHAVSGEVVTGIAPTIVDFQGGMFCDEPGLGKTITALSLILKTQGVL 408
            YM FSTEDGF F+I+ VSGEVVT +AP++ DF+GGMFCDEPGLGKTITALSL+LKTQG +
Sbjct: 331  YMSFSTEDGFRFYINTVSGEVVTEVAPSVRDFRGGMFCDEPGLGKTITALSLVLKTQGTI 390

Query: 407  ADPPDGVEVIWCTHNNDQRCGYYELSADNFNPGDVMPSWKRFMAQNERRGQLCSDECTPV 228
            ADPPDGV++ WC +NNDQRCGYYELS D+F+  D +   KR M Q+ RRG+L     TPV
Sbjct: 391  ADPPDGVQITWCVYNNDQRCGYYELSGDDFS--DTLLG-KRAMWQSARRGKL----LTPV 443

Query: 227  --------AXXXXXXXXXXXXXXXXSCPSKLGITSSTTSPSHATKLVTRCTGSLSCVPRN 72
                                     SCP K  + S +   S   K V RCT SLS + +N
Sbjct: 444  DGGSYSSPKRARLKDSGEQVVQFNESCPGK-EMKSLSVPCSEPVKRVVRCTRSLSRIKKN 502

Query: 71   LLGSYEGTSGFAIGKKLRKN 12
            LL  YEG  GF   KK+ +N
Sbjct: 503  LLHVYEGELGFGSKKKVGEN 522