BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019824
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29768.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|XP_002318193.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   113   2e-23

>emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/97 (68%), Positives = 81/97 (83%)
 Frame = -2

Query: 292 EVHGFHTADHTHPLFTQVYVKVETIVAEIKMAGYIPDGTCVLHDVEEEDKDHSLKTHSEK 113
           EVHGFHTAD + P + +VY KVE++  E+KM GY+PD +CVLHDVE EDK+H L  HSEK
Sbjct: 552 EVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEK 611

Query: 112 LAVAFGIMKIDPGLPIQVTMNLRICNDCHSAFRFISN 2
           LAVAFGIMK+D G+PIQVT NLR+C+DCH AF+FIS+
Sbjct: 612 LAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISS 648


>ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/97 (68%), Positives = 81/97 (83%)
 Frame = -2

Query: 292 EVHGFHTADHTHPLFTQVYVKVETIVAEIKMAGYIPDGTCVLHDVEEEDKDHSLKTHSEK 113
           EVHGFHTAD + P + +VY KVE++  E+KM GY+PD +CVLHDVE EDK+H L  HSEK
Sbjct: 583 EVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEK 642

Query: 112 LAVAFGIMKIDPGLPIQVTMNLRICNDCHSAFRFISN 2
           LAVAFGIMK+D G+PIQVT NLR+C+DCH AF+FIS+
Sbjct: 643 LAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISS 679


>ref|XP_002318193.1| predicted protein [Populus trichocarpa] gi|222858866|gb|EEE96413.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/98 (63%), Positives = 81/98 (82%)
 Frame = -2

Query: 295 KEVHGFHTADHTHPLFTQVYVKVETIVAEIKMAGYIPDGTCVLHDVEEEDKDHSLKTHSE 116
           K++ GFHTAD  +P   +VY K+E++  E+KMAGY+PD +C LHDVEEEDK+  L  HSE
Sbjct: 408 KDILGFHTADQENPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSE 467

Query: 115 KLAVAFGIMKIDPGLPIQVTMNLRICNDCHSAFRFISN 2
           KLAVAFG++KIDPG+ I+VT NLR+CNDCHSAF++IS+
Sbjct: 468 KLAVAFGVLKIDPGMVIRVTKNLRVCNDCHSAFKYISH 505


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/96 (53%), Positives = 67/96 (69%)
 Frame = -2

Query: 292 EVHGFHTADHTHPLFTQVYVKVETIVAEIKMAGYIPDGTCVLHDVEEEDKDHSLKTHSEK 113
           +VH F   D  HP   Q+Y  +E +V E++  GY+PD  CVLHDVE + K+H L THSEK
Sbjct: 673 KVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEK 732

Query: 112 LAVAFGIMKIDPGLPIQVTMNLRICNDCHSAFRFIS 5
           LAVA+G MK+  G  ++V  NLRIC DCH+AF+F+S
Sbjct: 733 LAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMS 768


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/94 (54%), Positives = 71/94 (75%)
 Frame = -2

Query: 286 HGFHTADHTHPLFTQVYVKVETIVAEIKMAGYIPDGTCVLHDVEEEDKDHSLKTHSEKLA 107
           H F  AD +HP   ++Y  +E +  +IKMAGYIPD + VLHD+ EE+K+++L THSEKLA
Sbjct: 567 HLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLA 626

Query: 106 VAFGIMKIDPGLPIQVTMNLRICNDCHSAFRFIS 5
           +AFG++   PG+ ++VT NLRIC DCH+A +FIS
Sbjct: 627 IAFGLLNTRPGVVLRVTKNLRICGDCHAATKFIS 660