BLASTX nr result

ID: Coptis23_contig00019817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019817
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78610.1| helix-loop-helix protein [Populus tomentosa]            75   6e-12
ref|XP_002309955.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002281083.2| PREDICTED: transcription factor bHLH96-like ...    75   7e-12
ref|XP_002319028.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
gb|ABK92747.1| unknown [Populus trichocarpa]                           74   2e-11

>gb|AFZ78610.1| helix-loop-helix protein [Populus tomentosa]
          Length = 343

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   LLHLNVTTLEETVLYSFSVKVEDECKLKSVDEIASAVHQMLQRNQEESTLS 155
           +LHLNVTT+++ VLYS SVKVED+CKL SVDEIA+AV+QML R QEES L+
Sbjct: 292 VLHLNVTTVDQIVLYSLSVKVEDDCKLSSVDEIATAVYQMLGRIQEESMLN 342


>ref|XP_002309955.1| predicted protein [Populus trichocarpa] gi|222852858|gb|EEE90405.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/49 (71%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   LLHLNVTTLEETVLYSFSVKVEDECKLKSVDEIASAVHQMLQRNQEEST 149
           +LHLNVTT+++  LYSFSVKVEDECKL SVDEIA+AVH+M+ R QE++T
Sbjct: 261 ILHLNVTTVDQMALYSFSVKVEDECKLTSVDEIAAAVHEMVGRIQEDAT 309


>ref|XP_002281083.2| PREDICTED: transcription factor bHLH96-like [Vitis vinifera]
           gi|296088296|emb|CBI36741.3| unnamed protein product
           [Vitis vinifera]
          Length = 323

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 46/51 (90%)
 Frame = +3

Query: 3   LLHLNVTTLEETVLYSFSVKVEDECKLKSVDEIASAVHQMLQRNQEESTLS 155
           +LHLNVTT+++TVLYS SVKVED+CKL SVD+IA+AV+QML R QEE+ ++
Sbjct: 273 ILHLNVTTIDQTVLYSLSVKVEDDCKLTSVDDIATAVYQMLGRIQEEAMIN 323


>ref|XP_002319028.1| predicted protein [Populus trichocarpa] gi|222857404|gb|EEE94951.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   LLHLNVTTLEETVLYSFSVKVEDECKLKSVDEIASAVHQMLQRNQEESTLS 155
           +LHLNV+T+++ VLYS SVKVED+CKL SVDEIA+AV+QML R QEES L+
Sbjct: 138 VLHLNVSTVDQIVLYSLSVKVEDDCKLSSVDEIATAVYQMLGRIQEESMLN 188


>gb|ABK92747.1| unknown [Populus trichocarpa]
          Length = 97

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   LLHLNVTTLEETVLYSFSVKVEDECKLKSVDEIASAVHQMLQRNQEESTLS 155
           +LHLNV+T+++ VLYS SVKVED+CKL SVDEIA+AV+QML R QEES L+
Sbjct: 46  VLHLNVSTVDQIVLYSLSVKVEDDCKLSSVDEIATAVYQMLGRIQEESMLN 96


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