BLASTX nr result

ID: Coptis23_contig00019805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019805
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270040.2| PREDICTED: protein MOR1-like, partial [Vitis...   442   e-122
emb|CBI25829.3| unnamed protein product [Vitis vinifera]              442   e-122
ref|XP_002300496.1| microtubule organization protein [Populus tr...   433   e-119
dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicoti...   426   e-117
ref|NP_001044618.1| Os01g0816400 [Oryza sativa Japonica Group] g...   425   e-117

>ref|XP_002270040.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
          Length = 977

 Score =  442 bits (1137), Expect = e-122
 Identities = 228/313 (72%), Positives = 251/313 (80%)
 Frame = +3

Query: 69   SSLVRKSAASMLSGKKPIQAVPXXXXXXXXXXXXXXXXXXXXXXXALGSVELEDVEPADM 248
            SS V+KSAASMLSGKKP+QA P                          SVE EDVEPADM
Sbjct: 534  SSFVKKSAASMLSGKKPVQAAPANKKGGPVKSGGNKKSDGGGQIKVSKSVEPEDVEPADM 593

Query: 249  SLEEIESRLGSLLKEDTISQLKSTVWKERLTAISSLKLEVEGLENLDQSAEILIRLLCAV 428
            SLEEIESRLGSL++ DTISQLKST WKERL AI SLK +VEG+++L+QS EILIRLLC V
Sbjct: 594  SLEEIESRLGSLIQADTISQLKSTAWKERLEAIGSLKQQVEGVQDLNQSVEILIRLLCTV 653

Query: 429  PGWGEKNXXXXXXXXEIITHVASTVKKFPKRCVVLCLQGISERVADIKTRIHAMKCLASF 608
            PGW EKN        E+I ++AST  KFPK+CVVLCL GISERVADIKTR HAMKCL +F
Sbjct: 654  PGWNEKNVQVQQQVIEVINYIASTAAKFPKKCVVLCLHGISERVADIKTRAHAMKCLTTF 713

Query: 609  SEAVGPGFIFERLYKIMKEHKNPKVLSEGITWMVSAVEDFGISLIKLKDLIEFCKDTGLQ 788
            SEAVGP FIFERLYKIMKEHKNPKVLSEGI WMVSAVEDFG+S +KLKDLI+FCKDTGLQ
Sbjct: 714  SEAVGPEFIFERLYKIMKEHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQ 773

Query: 789  SSNATIRNATIKLIGAVHKFIGPDIKGFLTDVKPALLSALDAEYEKNPFEGTSAAPRKTV 968
            SS A  RNATIKLIGA+HKF+GPDIKGFLTDVKPALLSALDAEYEKNP+EG SA  +KTV
Sbjct: 774  SSAAATRNATIKLIGALHKFVGPDIKGFLTDVKPALLSALDAEYEKNPYEGASAVTKKTV 833

Query: 969  KASESTLSMSAGG 1007
            +ASES  S+SAGG
Sbjct: 834  RASESMSSVSAGG 846


>emb|CBI25829.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  442 bits (1137), Expect = e-122
 Identities = 228/313 (72%), Positives = 251/313 (80%)
 Frame = +3

Query: 69   SSLVRKSAASMLSGKKPIQAVPXXXXXXXXXXXXXXXXXXXXXXXALGSVELEDVEPADM 248
            SS V+KSAASMLSGKKP+QA P                          SVE EDVEPADM
Sbjct: 531  SSFVKKSAASMLSGKKPVQAAPANKKGGPVKSGGNKKSDGGGQIKVSKSVEPEDVEPADM 590

Query: 249  SLEEIESRLGSLLKEDTISQLKSTVWKERLTAISSLKLEVEGLENLDQSAEILIRLLCAV 428
            SLEEIESRLGSL++ DTISQLKST WKERL AI SLK +VEG+++L+QS EILIRLLC V
Sbjct: 591  SLEEIESRLGSLIQADTISQLKSTAWKERLEAIGSLKQQVEGVQDLNQSVEILIRLLCTV 650

Query: 429  PGWGEKNXXXXXXXXEIITHVASTVKKFPKRCVVLCLQGISERVADIKTRIHAMKCLASF 608
            PGW EKN        E+I ++AST  KFPK+CVVLCL GISERVADIKTR HAMKCL +F
Sbjct: 651  PGWNEKNVQVQQQVIEVINYIASTAAKFPKKCVVLCLHGISERVADIKTRAHAMKCLTTF 710

Query: 609  SEAVGPGFIFERLYKIMKEHKNPKVLSEGITWMVSAVEDFGISLIKLKDLIEFCKDTGLQ 788
            SEAVGP FIFERLYKIMKEHKNPKVLSEGI WMVSAVEDFG+S +KLKDLI+FCKDTGLQ
Sbjct: 711  SEAVGPEFIFERLYKIMKEHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQ 770

Query: 789  SSNATIRNATIKLIGAVHKFIGPDIKGFLTDVKPALLSALDAEYEKNPFEGTSAAPRKTV 968
            SS A  RNATIKLIGA+HKF+GPDIKGFLTDVKPALLSALDAEYEKNP+EG SA  +KTV
Sbjct: 771  SSAAATRNATIKLIGALHKFVGPDIKGFLTDVKPALLSALDAEYEKNPYEGASAVTKKTV 830

Query: 969  KASESTLSMSAGG 1007
            +ASES  S+SAGG
Sbjct: 831  RASESMSSVSAGG 843


>ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa]
            gi|222847754|gb|EEE85301.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2036

 Score =  433 bits (1114), Expect = e-119
 Identities = 221/318 (69%), Positives = 253/318 (79%), Gaps = 1/318 (0%)
 Frame = +3

Query: 57   EVVGSSLVRKSAASMLSGKKPIQAVPXXXXXXXXXXXXXXXXXXXXXXXALGSVEL-EDV 233
            E    S V+KSAASMLSGK+P  A                         +  ++E  EDV
Sbjct: 532  ETSEGSFVKKSAASMLSGKRPAPAAAANKKAAPTKSGVSKKGDGAGRAESSRAIEPPEDV 591

Query: 234  EPADMSLEEIESRLGSLLKEDTISQLKSTVWKERLTAISSLKLEVEGLENLDQSAEILIR 413
            EPA+MSLEEIE+RLGSL++ DT+SQLKS VWKERL AISS KL+VEGL+NLDQS EILIR
Sbjct: 592  EPAEMSLEEIETRLGSLIQADTVSQLKSAVWKERLEAISSFKLQVEGLQNLDQSVEILIR 651

Query: 414  LLCAVPGWGEKNXXXXXXXXEIITHVASTVKKFPKRCVVLCLQGISERVADIKTRIHAMK 593
            LLCA+PGW EKN        E+IT++AST  KFPK+CVVLCL GISERVADIKTR HAMK
Sbjct: 652  LLCAIPGWNEKNVQVQQQVIEVITYLASTASKFPKKCVVLCLLGISERVADIKTRAHAMK 711

Query: 594  CLASFSEAVGPGFIFERLYKIMKEHKNPKVLSEGITWMVSAVEDFGISLIKLKDLIEFCK 773
            CL +FSEAVGPGF+F+RLYKIMKEHKNPKVLSEGI WMVSA++DFG+S +KLKDLI+FCK
Sbjct: 712  CLTTFSEAVGPGFVFDRLYKIMKEHKNPKVLSEGIIWMVSAIDDFGVSHLKLKDLIDFCK 771

Query: 774  DTGLQSSNATIRNATIKLIGAVHKFIGPDIKGFLTDVKPALLSALDAEYEKNPFEGTSAA 953
            DTGLQSS A  RNATIKL+GA+HKF+GPDIKGFL DVKPALLSALDAEY+KNPFEG SAA
Sbjct: 772  DTGLQSSVAASRNATIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYDKNPFEGASAA 831

Query: 954  PRKTVKASESTLSMSAGG 1007
            P+KTV+ SEST S+S GG
Sbjct: 832  PKKTVRTSESTSSVSGGG 849


>dbj|BAB88648.1| microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]
          Length = 2029

 Score =  426 bits (1095), Expect = e-117
 Identities = 215/312 (68%), Positives = 250/312 (80%)
 Frame = +3

Query: 72   SLVRKSAASMLSGKKPIQAVPXXXXXXXXXXXXXXXXXXXXXXXALGSVELEDVEPADMS 251
            SLV++SAASMLSGKKP+QA P                       A   VE+EDVEPA+MS
Sbjct: 532  SLVKRSAASMLSGKKPVQAAPPSKKGASAKSGTNKRGDGATQLKASKPVEVEDVEPAEMS 591

Query: 252  LEEIESRLGSLLKEDTISQLKSTVWKERLTAISSLKLEVEGLENLDQSAEILIRLLCAVP 431
            LEEIES+LGSL++ +TI+QLKS VWKERL AISS K +VE L+ LD S EIL+RLLCAVP
Sbjct: 592  LEEIESKLGSLIQPETITQLKSAVWKERLEAISSFKEQVEALKELDPSVEILVRLLCAVP 651

Query: 432  GWGEKNXXXXXXXXEIITHVASTVKKFPKRCVVLCLQGISERVADIKTRIHAMKCLASFS 611
            GW EKN        +II H+AST  K+PK+CVVLCLQG+SERVADIKTR  AMKCL +F 
Sbjct: 652  GWSEKNVQVQQLVIDIINHIASTASKYPKKCVVLCLQGVSERVADIKTRAQAMKCLTTFC 711

Query: 612  EAVGPGFIFERLYKIMKEHKNPKVLSEGITWMVSAVEDFGISLIKLKDLIEFCKDTGLQS 791
            EAVGPGF+FERLYKIMKEHKNPKVLSEGI WMV+AV+DFG+S +KLKDLI+FCKDTGLQS
Sbjct: 712  EAVGPGFVFERLYKIMKEHKNPKVLSEGILWMVTAVDDFGVSHLKLKDLIDFCKDTGLQS 771

Query: 792  SNATIRNATIKLIGAVHKFIGPDIKGFLTDVKPALLSALDAEYEKNPFEGTSAAPRKTVK 971
            S A  RNATIKLIGA+HKF+GPDIKGFL+DVKPAL+SALDAEY+KNPFEG S AP+KTVK
Sbjct: 772  SAAATRNATIKLIGALHKFVGPDIKGFLSDVKPALISALDAEYDKNPFEGASVAPKKTVK 831

Query: 972  ASESTLSMSAGG 1007
             S++  S+S+GG
Sbjct: 832  TSDAP-SLSSGG 842


>ref|NP_001044618.1| Os01g0816400 [Oryza sativa Japonica Group]
            gi|75251094|sp|Q5N749.1|MOR1_ORYSJ RecName: Full=Protein
            MOR1; AltName: Full=Protein GEM1; AltName: Full=Protein
            MICROTUBULE ORGANIZATION 1 gi|56785068|dbj|BAD82707.1|
            putative microtubule bundling polypeptide TMBP200 [Oryza
            sativa Japonica Group] gi|56785322|dbj|BAD82281.1|
            putative microtubule bundling polypeptide TMBP200 [Oryza
            sativa Japonica Group] gi|113534149|dbj|BAF06532.1|
            Os01g0816400 [Oryza sativa Japonica Group]
            gi|222619446|gb|EEE55578.1| hypothetical protein
            OsJ_03864 [Oryza sativa Japonica Group]
          Length = 1997

 Score =  425 bits (1093), Expect = e-117
 Identities = 216/316 (68%), Positives = 251/316 (79%)
 Frame = +3

Query: 57   EVVGSSLVRKSAASMLSGKKPIQAVPXXXXXXXXXXXXXXXXXXXXXXXALGSVELEDVE 236
            EV+ SS +R+SAASMLSGKKP+QAVP                       A  +  +EDVE
Sbjct: 525  EVMDSSSMRRSAASMLSGKKPVQAVPATKKSGPAKSATAKKTDGGPQSKASAAPVIEDVE 584

Query: 237  PADMSLEEIESRLGSLLKEDTISQLKSTVWKERLTAISSLKLEVEGLENLDQSAEILIRL 416
            P++MSLEEIE +L S++K +TISQLKSTVWKERL AIS LK EVE L  LD+SAE+L+RL
Sbjct: 585  PSEMSLEEIEEKLSSVVKSETISQLKSTVWKERLEAISMLKQEVESLTELDKSAELLVRL 644

Query: 417  LCAVPGWGEKNXXXXXXXXEIITHVASTVKKFPKRCVVLCLQGISERVADIKTRIHAMKC 596
            LCAVPGW EKN        E+ T++ASTV +FPKRCVVLCL GISERVADIKTR HAMKC
Sbjct: 645  LCAVPGWSEKNVQVQQQVIEVSTYIASTVNRFPKRCVVLCLLGISERVADIKTRGHAMKC 704

Query: 597  LASFSEAVGPGFIFERLYKIMKEHKNPKVLSEGITWMVSAVEDFGISLIKLKDLIEFCKD 776
            L +F EAVGPGF+FERLYKIMKEHKNPKVLSEGI WMVSAVEDFGIS +KLKD I+FCKD
Sbjct: 705  LTAFCEAVGPGFVFERLYKIMKEHKNPKVLSEGILWMVSAVEDFGISNLKLKDTIDFCKD 764

Query: 777  TGLQSSNATIRNATIKLIGAVHKFIGPDIKGFLTDVKPALLSALDAEYEKNPFEGTSAAP 956
             GLQSS A  RNATIKLIG +HKF+GPDIKGFL+DVKPALLS LDAEYEKNPFEGT++AP
Sbjct: 765  IGLQSSAAATRNATIKLIGVLHKFVGPDIKGFLSDVKPALLSTLDAEYEKNPFEGTASAP 824

Query: 957  RKTVKASESTLSMSAG 1004
            ++TV+A+++  S S+G
Sbjct: 825  KRTVRAADAVSSASSG 840


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