BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019802
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   437   e-120
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              430   e-118
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   400   e-109
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   387   e-105
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   385   e-104

>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  437 bits (1125), Expect = e-120
 Identities = 226/344 (65%), Positives = 264/344 (76%)
 Frame = +2

Query: 245  KRSFEDMQSQTKMVVVSQEPVFKKQNGSHSVKSFDPRSYQKKVYEVARRRNTIAVLDTGA 424
            KRSF++M  +      S  P     + S S K   PRSYQ KV+EVA+RRNTIAVLDTG 
Sbjct: 11   KRSFDEMNLKRDADDDSNPPPSPLPSSSSSSKELSPRSYQWKVFEVAKRRNTIAVLDTGT 70

Query: 425  GKTMIAVMLIREVGVVLKERKEKKLIIFLAPTVHLVNQQFQVIKSHTDLNVEEYFGEKGV 604
            GKTMIA+MLIRE+G  +K    K  IIFLAPTVHLVNQQF+VIK  T   VEEY+G KGV
Sbjct: 71   GKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLVNQQFKVIKDSTGFEVEEYYGAKGV 130

Query: 605  DEWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCLLVFDECHRATGNHPYTKIM 784
            DEW +  WE E +E+DVLVMTPQILLDALRKAFLSL+ VCL++ DECHRATGNHPYTKIM
Sbjct: 131  DEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSLETVCLMIVDECHRATGNHPYTKIM 190

Query: 785  KEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVSTLESILDSKIYTIEDRTELESFV 964
            KEFYHK  +KPKIFGMTASPVIRKGVSS+MDCE+Q+S LESILD +IYTIEDRTELE F+
Sbjct: 191  KEFYHKSVDKPKIFGMTASPVIRKGVSSSMDCENQISELESILDCQIYTIEDRTELEVFI 250

Query: 965  PSPVEEKRYYNTILFFHEELKEKLGSSRSKFDDLLVNKQSSFPSQYKDTDETFKALRKKL 1144
            PS  E  R+Y+   F + +LK KL SS SKFD+LL+N Q S  +QYKD D+  KALRK+L
Sbjct: 251  PSAKEINRFYDASQFHNLDLKAKLKSSWSKFDNLLLNLQGSPMTQYKDMDDKLKALRKRL 310

Query: 1145 LSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRNS 1276
             + HAKIL+CLD LG +CAYEA KVC E   SN+++E E YR S
Sbjct: 311  SNDHAKILYCLDDLGLICAYEAVKVCIENV-SNAQEEFEFYRQS 353


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  430 bits (1106), Expect = e-118
 Identities = 226/352 (64%), Positives = 264/352 (75%), Gaps = 8/352 (2%)
 Frame = +2

Query: 245  KRSFEDMQSQTKMVVVSQEPVFKKQNGSHSVKSFDPRSYQKKVYEVARRRNTIAVLDTGA 424
            KRSF++M  +      S  P     + S S K   PRSYQ KV+EVA+RRNTIAVLDTG 
Sbjct: 11   KRSFDEMNLKRDADDDSNPPPSPLPSSSSSSKELSPRSYQWKVFEVAKRRNTIAVLDTGT 70

Query: 425  GKTMIAVMLIREVGVVLKERKEKKLIIFLAPTVHLVNQ--------QFQVIKSHTDLNVE 580
            GKTMIA+MLIRE+G  +K    K  IIFLAPTVHLVNQ        QF+VIK  T   VE
Sbjct: 71   GKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLVNQACFFFIFSQFKVIKDSTGFEVE 130

Query: 581  EYFGEKGVDEWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCLLVFDECHRATG 760
            EY+G KGVDEW +  WE E +E+DVLVMTPQILLDALRKAFLSL+ VCL++ DECHRATG
Sbjct: 131  EYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSLETVCLMIVDECHRATG 190

Query: 761  NHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVSTLESILDSKIYTIED 940
            NHPYTKIMKEFYHK  +KPKIFGMTASPVIRKGVSS+MDCE+Q+S LESILD +IYTIED
Sbjct: 191  NHPYTKIMKEFYHKSVDKPKIFGMTASPVIRKGVSSSMDCENQISELESILDCQIYTIED 250

Query: 941  RTELESFVPSPVEEKRYYNTILFFHEELKEKLGSSRSKFDDLLVNKQSSFPSQYKDTDET 1120
            RTELE F+PS  E  R+Y+   F + +LK KL SS SKFD+LL+N Q S  +QYKD D+ 
Sbjct: 251  RTELEVFIPSAKEINRFYDASQFHNLDLKAKLKSSWSKFDNLLLNLQGSPMTQYKDMDDK 310

Query: 1121 FKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRNS 1276
             KALRK+L + HAKIL+CLD LG +CAYEA KVC E   SN+++E E YR S
Sbjct: 311  LKALRKRLSNDHAKILYCLDDLGLICAYEAVKVCIENV-SNAQEEFEFYRQS 361


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
            gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1660

 Score =  400 bits (1027), Expect = e-109
 Identities = 202/355 (56%), Positives = 259/355 (72%), Gaps = 14/355 (3%)
 Frame = +2

Query: 224  ENNNSKNKRSFEDMQSQTKMV--------------VVSQEPVFKKQNGSHSVKSFDPRSY 361
            E + +  KRSF +M +    V                SQ+P       + + K F+PRSY
Sbjct: 6    EQDRNPLKRSFNEMNNLQDFVDMGLNGTNHHHDHDAASQKPDSTITTSTTTGKGFNPRSY 65

Query: 362  QKKVYEVARRRNTIAVLDTGAGKTMIAVMLIREVGVVLKERKEKKLIIFLAPTVHLVNQQ 541
            Q KV+EVA +RNTIAVL+TGAGKTMIAVMLIRE+G  +K    KKLIIFLAPTVHLVNQQ
Sbjct: 66   QVKVFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAIKSNDFKKLIIFLAPTVHLVNQQ 125

Query: 542  FQVIKSHTDLNVEEYFGEKGVDEWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLV 721
            ++VIK +T+  V EY+G KG+D W    WE E NE+DVLVMTPQILLDALRKAFL+L++V
Sbjct: 126  YEVIKDNTNFKVGEYYGAKGIDGWSMKVWEKEINEHDVLVMTPQILLDALRKAFLNLEMV 185

Query: 722  CLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVSTL 901
             L++ DECHR TGNHP TKIMKEFYHK SNKPKIFGMTASPV++KGVSSA+DCEDQ+S L
Sbjct: 186  SLMIIDECHRTTGNHPCTKIMKEFYHKLSNKPKIFGMTASPVVQKGVSSAVDCEDQISEL 245

Query: 902  ESILDSKIYTIEDRTELESFVPSPVEEKRYYNTILFFHEELKEKLGSSRSKFDDLLVNKQ 1081
            E+ILDS+IYTIEDRTE++  VPS  E  ++Y+    +  ++K K+ +S SKFD  L++ Q
Sbjct: 246  ETILDSQIYTIEDRTEMDVHVPSAREICKFYDIAQLYSSDIKSKIEASWSKFDASLLSLQ 305

Query: 1082 SSFPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNS 1246
             S  S YKD D+ +K L+++L + ++KIL+CL+ LG +CAYEA K+C E + S +
Sbjct: 306  GSIQSSYKDADDRYKTLQQRLYNDYSKILNCLEELGLICAYEAVKICLENSPSTA 360


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  387 bits (994), Expect = e-105
 Identities = 197/314 (62%), Positives = 236/314 (75%)
 Frame = +2

Query: 341  SFDPRSYQKKVYEVARRRNTIAVLDTGAGKTMIAVMLIREVGVVLKERKEKKLIIFLAPT 520
            + +PR YQ +VYEVARRRNTIAVLDTG+GKT+IAVML++EVG  +K    KKLIIFLAPT
Sbjct: 63   NMNPRRYQIEVYEVARRRNTIAVLDTGSGKTLIAVMLMKEVGQAIKTSGVKKLIIFLAPT 122

Query: 521  VHLVNQQFQVIKSHTDLNVEEYFGEKGVDEWDSMRWETEANENDVLVMTPQILLDALRKA 700
            VHLVNQQF+ IK  TD  VEEY+G KGVD W    WE E + NDVLVMTPQILLDALRKA
Sbjct: 123  VHLVNQQFKNIKFLTDFQVEEYYGAKGVDTWTLKTWEKEISNNDVLVMTPQILLDALRKA 182

Query: 701  FLSLKLVCLLVFDECHRATGNHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDC 880
            FL ++++CL+V DECHR  GNHPYTKIMKEFYH+ + KPKIFGMTASPV +KGVSS MDC
Sbjct: 183  FLRMEMICLIVIDECHRTIGNHPYTKIMKEFYHQANEKPKIFGMTASPVGKKGVSSTMDC 242

Query: 881  EDQVSTLESILDSKIYTIEDRTELESFVPSPVEEKRYYNTILFFHEELKEKLGSSRSKFD 1060
            EDQ+S LESILDS+ YT+EDRTE++  VPS  E  RYY+   F    LK K+ +   KFD
Sbjct: 243  EDQISELESILDSQRYTVEDRTEMDRCVPSAKESCRYYDQARFSALSLKPKIEALSFKFD 302

Query: 1061 DLLVNKQSSFPSQYKDTDETFKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARS 1240
             LL   QS+    YKD +  FK L +++ +  AKILHCL+ LG LCAYEA K+C E   S
Sbjct: 303  ALLSENQSN----YKDVENKFKTLSQRMSNELAKILHCLEDLGILCAYEAVKICHENF-S 357

Query: 1241 NSKDECELYRNSFV 1282
             S+ ECE+YR  ++
Sbjct: 358  KSEGECEIYRKGYL 371


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  385 bits (990), Expect = e-104
 Identities = 199/354 (56%), Positives = 245/354 (69%)
 Frame = +2

Query: 221  EENNNSKNKRSFEDMQSQTKMVVVSQEPVFKKQNGSHSVKSFDPRSYQKKVYEVARRRNT 400
            EEN +   KR F D++            V   Q+  +  + F PR YQ +V+EV  RRNT
Sbjct: 6    EENRDGARKRRFSDLEPS----------VASDQSNFNVAEGFIPRRYQMEVFEVGMRRNT 55

Query: 401  IAVLDTGAGKTMIAVMLIREVGVVLKERKEKKLIIFLAPTVHLVNQQFQVIKSHTDLNVE 580
            IAVL TG+GKTMIAVMLI+E+G  +K   +KKLIIFLAPTVHLV+QQF VIK HTD  V 
Sbjct: 56   IAVLGTGSGKTMIAVMLIKEIGKAMKSSSDKKLIIFLAPTVHLVHQQFNVIKDHTDFEVA 115

Query: 581  EYFGEKGVDEWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCLLVFDECHRATG 760
            EY+G  GVD+W+   WE E +E DVLVMTPQILLDALRKA+  L  +CL++ DECHRATG
Sbjct: 116  EYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTICLMIIDECHRATG 175

Query: 761  NHPYTKIMKEFYHKYSNKPKIFGMTASPVIRKGVSSAMDCEDQVSTLESILDSKIYTIED 940
            NHPYTKIMKEFYHK  +KPKIFGMTASPVIRKGVSS++DCE Q++ LESILD+++Y IED
Sbjct: 176  NHPYTKIMKEFYHKSDSKPKIFGMTASPVIRKGVSSSVDCECQIADLESILDAQVYAIED 235

Query: 941  RTELESFVPSPVEEKRYYNTILFFHEELKEKLGSSRSKFDDLLVNKQSSFPSQYKDTDET 1120
            + E+E +VPS  E   +Y   +    ELK K+ +   KFD  L N Q +    YKD D  
Sbjct: 236  KKEVEIYVPSAKEICIFYEPAMPQTMELKAKIEALWFKFDASLSNSQEAMQGHYKDVDSK 295

Query: 1121 FKALRKKLLSYHAKILHCLDGLGFLCAYEAAKVCAETARSNSKDECELYRNSFV 1282
             KAL+K+L S H KI +CLD LG +CAYEA KV  E   S   +E ++YR SF+
Sbjct: 296  LKALKKRLSSDHLKITYCLDELGIMCAYEAIKVLFENV-SVPNEESDVYRESFL 348