BLASTX nr result

ID: Coptis23_contig00019796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019796
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus c...    74   2e-11
ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258...    72   4e-11
emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]    65   4e-09

>ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|222875257|gb|EEF12388.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/98 (43%), Positives = 57/98 (58%)
 Frame = +3

Query: 3   CLLSFATEKKSNSETYRLLVGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLR 182
           CL SFAT  KSN+ETYRLLVG LG +     +QD  L D +   S  R CSCCNEPW  R
Sbjct: 110 CLFSFATTNKSNAETYRLLVGKLGEDSSFVLDQDSPLDDHS---SVTRQCSCCNEPWIPR 166

Query: 183 LDAHRLLQPVGPEAAVLNVDLPATVENKRVHLCDGLKK 296
               +L++ +  ++   ++D+P +   K  H C  LKK
Sbjct: 167 GYCQKLMRAISVDSGAADLDVPLSGAIK--HDCSNLKK 202


>ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1|
           predicted protein [Populus trichocarpa]
          Length = 954

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/100 (48%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
 Frame = +3

Query: 3   CLLSFATEKKSNSETYRLLVGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLR 182
           CL SFAT  KSN+ETYRLLVG LG +     +QD LL D +   S  R CSCCNEPW  R
Sbjct: 110 CLFSFATTNKSNAETYRLLVGKLGEDSSFGLDQDPLLDDHS---SVARLCSCCNEPWIPR 166

Query: 183 LDAHRLLQ--PVGPEAAVLNVDLPATVENKRVHLCDGLKK 296
                L++   VG  AA L+V L  T++    H C  +KK
Sbjct: 167 GYFQNLMRAASVGSGAANLDVPLSGTIK----HDCSNIKK 202


>ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus communis]
           gi|223538751|gb|EEF40351.1| hypothetical protein
           RCOM_0607680 [Ricinus communis]
          Length = 1162

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/91 (43%), Positives = 49/91 (53%)
 Frame = +3

Query: 3   CLLSFATEKKSNSETYRLLVGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLR 182
           CL SFAT  KSN+ETYRLLVG LG  +    N+DH         SS +HCSCCNEPW LR
Sbjct: 110 CLFSFATINKSNAETYRLLVGKLGEGYRFGLNEDHT--------SSTQHCSCCNEPWILR 161

Query: 183 LDAHRLLQPVGPEAAVLNVDLPATVENKRVH 275
                L+Q     +     D PA  +   ++
Sbjct: 162 GYVQNLMQTNIAGSETAEFDAPAVYDQNNLN 192


>ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258654 [Vitis vinifera]
          Length = 877

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
 Frame = +3

Query: 3   CLLSFATEKKSNSETYRLLVGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLR 182
           CL SFAT  K N+ETYRLLVG LG +     + D +L++     SS RHCSCC++P+   
Sbjct: 107 CLFSFATINKYNAETYRLLVGKLGEDTNSVLDHDPILEEYKPSSSSTRHCSCCSKPYIPS 166

Query: 183 LDAHRLLQ--PVGPEAAVLNVDLPATVENKRVHLCDGLKK 296
               RL Q   +  EAA L++ L   VE    H  +GLKK
Sbjct: 167 ESDKRLFQTKSIESEAAELDLSLSGAVE----HSHEGLKK 202


>emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]
          Length = 778

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/101 (44%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +3

Query: 3   CLLSFATEKKSNSETYRLLVGTLGTEFECCDNQ-DHLLKDPASGFSSKRHCSCCNEPWKL 179
           CL S +T KKSNSET+RLLVG LG + EC   Q   L K+        + CSCCN+PW+ 
Sbjct: 110 CLFS-STIKKSNSETHRLLVGKLGLDLECLGFQRPFLKKESVLDSPDTKTCSCCNKPWRP 168

Query: 180 RLDAHRLLQPVGPEAAVLNVDLPATVENKRVHL--CDGLKK 296
              A RLLQ     A     D+P      R HL   D LKK
Sbjct: 169 GQIAQRLLQLRPTGAGFTKPDIPLHRLPGRSHLNHRDNLKK 209


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