BLASTX nr result

ID: Coptis23_contig00019784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019784
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   117   1e-24
ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
emb|CBI39086.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   114   6e-24

>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
            product [Vitis vinifera]
          Length = 1115

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/68 (76%), Positives = 62/68 (91%)
 Frame = +1

Query: 1    IHDGETLAEIKVRIQKKLQIPDNEFSMWKFAFLSLGQPKYLQDTDILLTHFRRIDPYGAW 180
            IH+GETLAE+KVRIQKKLQ+PD EFS WKFAFLSLG+P+YLQD+DI+ + F+R D YGAW
Sbjct: 1022 IHEGETLAEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAW 1081

Query: 181  EQYLGLQH 204
            EQYLGL+H
Sbjct: 1082 EQYLGLEH 1089


>ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1|
            predicted protein [Populus trichocarpa]
          Length = 1117

 Score =  116 bits (291), Expect = 2e-24
 Identities = 50/68 (73%), Positives = 62/68 (91%)
 Frame = +1

Query: 1    IHDGETLAEIKVRIQKKLQIPDNEFSMWKFAFLSLGQPKYLQDTDILLTHFRRIDPYGAW 180
            IH+GETLAE+K+RIQKKLQ+PD EF+ WKFAFLSLG+P+YLQD+D++ T F+R D YGAW
Sbjct: 1024 IHEGETLAEVKMRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVFTRFQRRDVYGAW 1083

Query: 181  EQYLGLQH 204
            EQYLGL+H
Sbjct: 1084 EQYLGLEH 1091


>ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1|
            predicted protein [Populus trichocarpa]
          Length = 1239

 Score =  115 bits (288), Expect = 4e-24
 Identities = 49/68 (72%), Positives = 62/68 (91%)
 Frame = +1

Query: 1    IHDGETLAEIKVRIQKKLQIPDNEFSMWKFAFLSLGQPKYLQDTDILLTHFRRIDPYGAW 180
            IH+GETLA++K+RIQKKLQ+PD EF+ WKFAFLSLG+P+YLQD+D++ T F+R D YGAW
Sbjct: 1146 IHEGETLAQVKMRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVFTRFQRRDVYGAW 1205

Query: 181  EQYLGLQH 204
            EQYLGL+H
Sbjct: 1206 EQYLGLEH 1213


>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/68 (75%), Positives = 61/68 (89%)
 Frame = +1

Query: 1    IHDGETLAEIKVRIQKKLQIPDNEFSMWKFAFLSLGQPKYLQDTDILLTHFRRIDPYGAW 180
            IH+GETLAE+K RIQKKLQ+PD EFS WKFAFLSLG+P+YLQD+DI+ + F+R D YGAW
Sbjct: 1023 IHEGETLAEVKERIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAW 1082

Query: 181  EQYLGLQH 204
            EQYLGL+H
Sbjct: 1083 EQYLGLEH 1090


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera]
          Length = 1117

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/68 (75%), Positives = 61/68 (89%)
 Frame = +1

Query: 1    IHDGETLAEIKVRIQKKLQIPDNEFSMWKFAFLSLGQPKYLQDTDILLTHFRRIDPYGAW 180
            IH+GETLAE+K RIQKKLQ+PD EFS WKFAFLSLG+P+YLQD+DI+ + F+R D YGAW
Sbjct: 1024 IHEGETLAEVKERIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAW 1083

Query: 181  EQYLGLQH 204
            EQYLGL+H
Sbjct: 1084 EQYLGLEH 1091


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