BLASTX nr result

ID: Coptis23_contig00019781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019781
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]   198   2e-48
ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002510598.1| conserved hypothetical protein [Ricinus comm...   180   5e-43
ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070...   166   8e-39
ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago...   166   8e-39

>emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]
          Length = 245

 Score =  198 bits (503), Expect = 2e-48
 Identities = 126/248 (50%), Positives = 150/248 (60%), Gaps = 20/248 (8%)
 Frame = +3

Query: 120 MEKTTKSKNKIFSFLPKTASV-SFHNP-PFSPGRDKR--TENLNKVKASNGGKGFSGPLR 287
           MEK  KSKN I  FLPK ASV +F N  PFSPGRD +  +++ NK KA   G+GFSGP+ 
Sbjct: 1   MEKPAKSKNMILKFLPKAASVINFQNSTPFSPGRDHKRSSDSTNKFKAHGAGRGFSGPMI 60

Query: 288 PPMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXX 467
             MIPVEA  +S+SG  FD QEPTSPK+SCMGQ+K K K     +K  +           
Sbjct: 61  S-MIPVEAHWRSRSGN-FDRQEPTSPKVSCMGQVKDKHKKRIPKTKRASPPKESKPREMK 118

Query: 468 XXXXXLRNIFSSAAKPGRKSDASAK-KPPLPDRAPSLCQMKQFTSGRDALADFDW----- 629
                LR IF S+   GRKSDAS+  KP LPDRAPSL QMK+F+SGR+A ++FDW     
Sbjct: 119 KQHSTLRRIFRSS-NSGRKSDASSDDKPSLPDRAPSLGQMKRFSSGRNAFSNFDWTAPVA 177

Query: 630 -------KYY---XXXXXXXXXXXVFIAHSAPILIGSGGVGRVALEPRKEINLWKRRTMD 779
                   YY                I  SAPIL+G    G VALEPRKEINLWKRRT+ 
Sbjct: 178 PVDSDHRSYYSDEERGDFEEEDEEFIIPFSAPILVG----GAVALEPRKEINLWKRRTLV 233

Query: 780 PPKPLQLN 803
           PP+PL+LN
Sbjct: 234 PPRPLRLN 241


>ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|222843674|gb|EEE81221.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  181 bits (460), Expect = 2e-43
 Identities = 122/253 (48%), Positives = 146/253 (57%), Gaps = 26/253 (10%)
 Frame = +3

Query: 120 MEKTTKSK-NKIFSFLPKTAS-VSFHNPPFSPGRDKRTENLNKVKASNGGKGFSGPLRPP 293
           MEK   +  N+I  FLPK AS V+FHN  FSPGRD+R+E ++K KA N GKGF+ P R  
Sbjct: 1   MEKQAAAPPNRILKFLPKAASAVNFHNLAFSPGRDRRSEIIHKHKA-NVGKGFN-PCRS- 57

Query: 294 MIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPI-----TXXXXXXXX 458
           MIPVE R + K+      +EPTSPKISCMGQIKHKKK N A  K +     T        
Sbjct: 58  MIPVEVRRQPKNESFETQEEPTSPKISCMGQIKHKKKMNKATYKRVSLPQETKPASQTQR 117

Query: 459 XXXXXXXXLRNIFSSAAKPGRKSDA-SAKKPPLPDRAPSLCQMKQFTSGRDALADFDW-- 629
                   L+ +F + +K GRKS+A    KP LPDRAPSL QMK+F SGRD LA FDW  
Sbjct: 118 QVMKHASKLKRLF-TGSKAGRKSNAFDGGKPTLPDRAPSLSQMKRFASGRDTLASFDWTA 176

Query: 630 -----------KYY-----XXXXXXXXXXXVFIAHSAPILIGSGGVGRVALEPRKEINLW 761
                       YY                V I  SAP+++G G    V L PRKE+NLW
Sbjct: 177 HQIAPVEPVGRDYYSDEERGDSFEDQEDEEVIIPFSAPMVLGGG----VDLLPRKEVNLW 232

Query: 762 KRRTMDPPKPLQL 800
           KRRTMDPP+PL+L
Sbjct: 233 KRRTMDPPEPLRL 245


>ref|XP_002510598.1| conserved hypothetical protein [Ricinus communis]
           gi|223551299|gb|EEF52785.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score =  180 bits (456), Expect = 5e-43
 Identities = 122/269 (45%), Positives = 151/269 (56%), Gaps = 42/269 (15%)
 Frame = +3

Query: 123 EKTTKSKNKIFSFLPKTAS-VSFHNPPFSPGRDKRTENL-----NKVKASNGGKGFSGPL 284
           ++  K KNKI  FLPK AS VSF NPPFSPGRDKR         N+VK S+ GKG+SGP+
Sbjct: 6   QQAAKPKNKILKFLPKAASAVSFQNPPFSPGRDKRIPEYHQHFHNRVK-SHVGKGYSGPI 64

Query: 285 RPPMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSK----------PIT 434
              +IP EAR ++    +F+  EPTSPKISCMGQIKHKKK  ++ SK            +
Sbjct: 65  -VSIIPDEARRRTSKNGSFENHEPTSPKISCMGQIKHKKKIINSSSKNKAKNQETEPEKS 123

Query: 435 XXXXXXXXXXXXXXXXLRNIFSSAAK----PGRKSDASA-KKPPLPD---RAPSLCQMKQ 590
                           ++ +FS+A K      R+SDAS   KPPL D   RAP+L Q+K+
Sbjct: 124 TSTSTPRREIKKHALTIKRMFSNAVKVPEHGRRRSDASMYDKPPLTDTSHRAPALSQLKR 183

Query: 591 FTSGRDALADFDW------------KYY------XXXXXXXXXXXVFIAHSAPILIGSGG 716
           F SGRD  A+FDW             YY                 V I  SAPI++G  G
Sbjct: 184 FASGRDTFANFDWTSQVVPAESDHRNYYSDDEEEERHSDHDYDEDVIIPFSAPIIVGP-G 242

Query: 717 VGRVALEPRKEINLWKRRTMDPPKPLQLN 803
           VG   L+PRKE+NLW+RRTM+PPKPLQLN
Sbjct: 243 VGN--LQPRKEVNLWRRRTMNPPKPLQLN 269


>ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070-like [Glycine max]
          Length = 246

 Score =  166 bits (420), Expect = 8e-39
 Identities = 105/246 (42%), Positives = 127/246 (51%), Gaps = 19/246 (7%)
 Frame = +3

Query: 123 EKTTKSKNKIFSFLPKTA----SVSFHNPPFSPGRDKRTENLNKVKASNGGKGFSGPLRP 290
           EK +K KNKIF  LPK A    S++F NPPFSPGRD + ++       +GGKGF      
Sbjct: 6   EKESKLKNKIFKILPKAAAAAVSMTFQNPPFSPGRDHKFKH-------HGGKGF---FSG 55

Query: 291 PMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXXX 470
           PMIPVEAR KSK G   + QEPTSPKISCMGQIKHKKK N       T            
Sbjct: 56  PMIPVEARRKSKDG-CVETQEPTSPKISCMGQIKHKKKKNQIKKAAKTMSMPTEEKKQAS 114

Query: 471 XXXXLRNIFSSAAK--PGRKSDASAKKPPLPDRAPSLCQMKQFTSGRDALADFDWK---- 632
               + +  S   K    RK  + A        AP L  M++F SGR+  ++FDWK    
Sbjct: 115 KFQRMMSFHSGKPKRPAARKQQSDADLESERSPAPPLGHMRRFASGRETFSNFDWKAQIA 174

Query: 633 --------YYXXXXXXXXXXXVFIAHSAPILIGSGGVG-RVALEPRKEINLWKRRTMDPP 785
                   YY           + I  SAP+ +G       +  +PRKEINLWKRRTM PP
Sbjct: 175 PEERDCYSYYDDRLESDAEDEIIIPFSAPLTVGGAASALNLNAQPRKEINLWKRRTMAPP 234

Query: 786 KPLQLN 803
           +PLQLN
Sbjct: 235 RPLQLN 240


>ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago truncatula]
           gi|355492883|gb|AES74086.1| Syringolide-induced protein
           14-1-1 [Medicago truncatula]
          Length = 245

 Score =  166 bits (420), Expect = 8e-39
 Identities = 113/252 (44%), Positives = 138/252 (54%), Gaps = 24/252 (9%)
 Frame = +3

Query: 120 MEKTTKSKNKIFSFLPKTASVSFHNPPFSPGRD--KRTENLNKVKASNGGKGFSGPLRPP 293
           MEK  K +NKI   LPKT +++F N PFSPGRD   R +N  K    +G KGFSGP++  
Sbjct: 1   MEKNLKLRNKILKILPKTITINFQNHPFSPGRDHKSRQDNATKWARPHGVKGFSGPIQS- 59

Query: 294 MIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXXXX 473
           +IP EAR KSK     D +EPTSPKISCMGQIKHKKK     SK +              
Sbjct: 60  IIPREARRKSKDINGIDYEEPTSPKISCMGQIKHKKKQIKK-SKDMEVKKHVNTFQKM-- 116

Query: 474 XXXLRNIFSSAAKPGRKSDASA---KKPPLPDRAPSLCQMKQFTSGRDALADFDWK---- 632
              L ++    ++  RKSDA A   KK  + +RA  + QMK+F SGRD  A+FDWK    
Sbjct: 117 ---LFHVGKPKSEGRRKSDACAVQDKKYAIEERATHVSQMKRFASGRDTFANFDWKAQVA 173

Query: 633 ------YYXXXXXXXXXXX-----VFIAHSAPILIGSGGVGRVAL----EPRKEINLWKR 767
                 YY                  I  SAP+    GGVG  +L    +PRKEINLWKR
Sbjct: 174 PEEIDNYYSDEERMQSDDDDDEEEFKIPFSAPL---GGGVGACSLGLDLKPRKEINLWKR 230

Query: 768 RTMDPPKPLQLN 803
           RTM PP+PLQL+
Sbjct: 231 RTMAPPRPLQLD 242


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