BLASTX nr result

ID: Coptis23_contig00019777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019777
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32284.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...   107   1e-21
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]   107   1e-21
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, p...   105   4e-21

>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/76 (67%), Positives = 65/76 (85%)
 Frame = +2

Query: 5   VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184
           VSAL+ K P +V+AV+EELVAR+KLLKCVSNLD EELG L+ FLH+++T+P Y+G L+G 
Sbjct: 345 VSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGL 404

Query: 185 TKKVLQMHAEDVNASD 232
           TKKV+QM AED+ ASD
Sbjct: 405 TKKVVQMRAEDIIASD 420


>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Vitis vinifera]
          Length = 528

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/76 (67%), Positives = 65/76 (85%)
 Frame = +2

Query: 5   VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184
           VSAL+ K P +V+AV+EELVAR+KLLKCVSNLD EELG L+ FLH+++T+P Y+G L+G 
Sbjct: 413 VSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGL 472

Query: 185 TKKVLQMHAEDVNASD 232
           TKKV+QM AED+ ASD
Sbjct: 473 TKKVVQMRAEDIIASD 488


>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
          Length = 570

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/76 (67%), Positives = 65/76 (85%)
 Frame = +2

Query: 5   VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184
           VSAL+ K P +V+AV+EELVAR+KLLKCVSNLD EELG L+ FLH+++T+P Y+G L+G 
Sbjct: 413 VSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGL 472

Query: 185 TKKVLQMHAEDVNASD 232
           TKKV+QM AED+ ASD
Sbjct: 473 TKKVVQMRAEDIIASD 488


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/77 (66%), Positives = 64/77 (83%)
 Frame = +2

Query: 2   LVSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIG 181
           LVS L+ K P +V+AV+EE+VARRKLLKCV NLD EELG L+ FLHK++TMP +SG L+G
Sbjct: 418 LVSVLSGKNPENVVAVMEEMVARRKLLKCVVNLDEEELGLLLGFLHKHSTMPRHSGLLMG 477

Query: 182 FTKKVLQMHAEDVNASD 232
            TKKVL+M A+D+ ASD
Sbjct: 478 LTKKVLEMRADDIRASD 494


>ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223536399|gb|EEF38048.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 525

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/76 (67%), Positives = 62/76 (81%)
 Frame = +2

Query: 5   VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184
           VS L+ K P  V+AV+EELVARRKL+KCVSNLD EELG L+ FLHKY+TMP +SG L+G 
Sbjct: 410 VSVLSGKNPEYVVAVMEELVARRKLIKCVSNLDEEELGLLLGFLHKYSTMPRHSGLLMGL 469

Query: 185 TKKVLQMHAEDVNASD 232
           T+KVL M A+D+ ASD
Sbjct: 470 TRKVLDMRADDIKASD 485


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