BLASTX nr result
ID: Coptis23_contig00019777
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00019777 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32284.3| unnamed protein product [Vitis vinifera] 107 1e-21 ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated... 107 1e-21 emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera] 107 1e-21 ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2... 105 3e-21 ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, p... 105 4e-21 >emb|CBI32284.3| unnamed protein product [Vitis vinifera] Length = 460 Score = 107 bits (266), Expect = 1e-21 Identities = 51/76 (67%), Positives = 65/76 (85%) Frame = +2 Query: 5 VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184 VSAL+ K P +V+AV+EELVAR+KLLKCVSNLD EELG L+ FLH+++T+P Y+G L+G Sbjct: 345 VSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGL 404 Query: 185 TKKVLQMHAEDVNASD 232 TKKV+QM AED+ ASD Sbjct: 405 TKKVVQMRAEDIIASD 420 >ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Vitis vinifera] Length = 528 Score = 107 bits (266), Expect = 1e-21 Identities = 51/76 (67%), Positives = 65/76 (85%) Frame = +2 Query: 5 VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184 VSAL+ K P +V+AV+EELVAR+KLLKCVSNLD EELG L+ FLH+++T+P Y+G L+G Sbjct: 413 VSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGL 472 Query: 185 TKKVLQMHAEDVNASD 232 TKKV+QM AED+ ASD Sbjct: 473 TKKVVQMRAEDIIASD 488 >emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera] Length = 570 Score = 107 bits (266), Expect = 1e-21 Identities = 51/76 (67%), Positives = 65/76 (85%) Frame = +2 Query: 5 VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184 VSAL+ K P +V+AV+EELVAR+KLLKCVSNLD EELG L+ FLH+++T+P Y+G L+G Sbjct: 413 VSALSGKNPENVVAVMEELVARKKLLKCVSNLDTEELGLLLAFLHRHSTVPRYAGLLMGL 472 Query: 185 TKKVLQMHAEDVNASD 232 TKKV+QM AED+ ASD Sbjct: 473 TKKVVQMRAEDIIASD 488 >ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1| predicted protein [Populus trichocarpa] Length = 534 Score = 105 bits (263), Expect = 3e-21 Identities = 51/77 (66%), Positives = 64/77 (83%) Frame = +2 Query: 2 LVSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIG 181 LVS L+ K P +V+AV+EE+VARRKLLKCV NLD EELG L+ FLHK++TMP +SG L+G Sbjct: 418 LVSVLSGKNPENVVAVMEEMVARRKLLKCVVNLDEEELGLLLGFLHKHSTMPRHSGLLMG 477 Query: 182 FTKKVLQMHAEDVNASD 232 TKKVL+M A+D+ ASD Sbjct: 478 LTKKVLEMRADDIRASD 494 >ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, putative [Ricinus communis] gi|223536399|gb|EEF38048.1| U3 small nucleolar RNA-associated protein, putative [Ricinus communis] Length = 525 Score = 105 bits (262), Expect = 4e-21 Identities = 51/76 (67%), Positives = 62/76 (81%) Frame = +2 Query: 5 VSALNRKEPRSVMAVLEELVARRKLLKCVSNLDIEELGFLIRFLHKYTTMPSYSGFLIGF 184 VS L+ K P V+AV+EELVARRKL+KCVSNLD EELG L+ FLHKY+TMP +SG L+G Sbjct: 410 VSVLSGKNPEYVVAVMEELVARRKLIKCVSNLDEEELGLLLGFLHKYSTMPRHSGLLMGL 469 Query: 185 TKKVLQMHAEDVNASD 232 T+KVL M A+D+ ASD Sbjct: 470 TRKVLDMRADDIKASD 485