BLASTX nr result

ID: Coptis23_contig00019772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019772
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863607.1| predicted protein [Arabidopsis lyrata subsp....    87   2e-15
emb|CBI21908.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002262623.2| PREDICTED: uncharacterized protein LOC100242...    85   5e-15
emb|CAN60169.1| hypothetical protein VITISV_003665 [Vitis vinifera]    85   5e-15
ref|NP_199228.2| uncharacterized protein [Arabidopsis thaliana] ...    84   9e-15

>ref|XP_002863607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309442|gb|EFH39866.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
 Frame = +3

Query: 18  MDAKSLAKSKRAHTQHKNKKFHPNPKSKKQPITVXXXXXXXXXXKQQNADKSRKN-IGTN 194
           MD+KSLAKSKRAHTQH +KK H   K K   ++            +      R + + +N
Sbjct: 1   MDSKSLAKSKRAHTQHHSKKSHSVHKPKGPGVSEKNPEKLQGTQTKSPVQSRRVSALPSN 60

Query: 195 WDRYEEEFDDSENSFIDEKYSDVVLPKSKGADFGHLISEA----NSKLEYQIN 341
           WDRY++E D +E+S I +  SDV+LPKSKGAD+ HLISEA    +SK+E  ++
Sbjct: 61  WDRYDDELDAAEDSSISQP-SDVILPKSKGADYLHLISEAQAVSHSKIENNLD 112


>emb|CBI21908.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 8/113 (7%)
 Frame = +3

Query: 9   LLAMDAKSLAKSKRAHTQHKNKKFHPNPKSKKQPITVXXXXXXXXXXKQQNADKSRKNIG 188
           L  MDAK+LAKSKRAH+QH +K+ H N  SK                 +Q  +K  +++G
Sbjct: 22  LFKMDAKALAKSKRAHSQHHSKRPHSNKTSKAPSAGNVGAGNAKKQPGKQIREKPHQSMG 81

Query: 189 -----TNWDRYEEEFDD-SENSFID--EKYSDVVLPKSKGADFGHLISEANSK 323
                +NWDRYEEEFD  SE   I+   + +DV++PKSKGAD+G LISEA S+
Sbjct: 82  LSRLPSNWDRYEEEFDSGSEGPSINSTNQANDVIVPKSKGADYGELISEAISQ 134


>ref|XP_002262623.2| PREDICTED: uncharacterized protein LOC100242390 [Vitis vinifera]
          Length = 450

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
 Frame = +3

Query: 18  MDAKSLAKSKRAHTQHKNKKFHPNPKSKKQPITVXXXXXXXXXXKQQNADKSRKNIG--- 188
           MDAK+LAKSKRAH+QH +K+ H N  SK                 +Q  +K  +++G   
Sbjct: 1   MDAKALAKSKRAHSQHHSKRPHSNKTSKAPSAGNVGAGNAKKQPGKQIREKPHQSMGLSR 60

Query: 189 --TNWDRYEEEFDD-SENSFID--EKYSDVVLPKSKGADFGHLISEANSK 323
             +NWDRYEEEFD  SE   I+   + +DV++PKSKGAD+G LISEA S+
Sbjct: 61  LPSNWDRYEEEFDSGSEGPSINSTNQANDVIVPKSKGADYGELISEAISQ 110


>emb|CAN60169.1| hypothetical protein VITISV_003665 [Vitis vinifera]
          Length = 484

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
 Frame = +3

Query: 18  MDAKSLAKSKRAHTQHKNKKFHPNPKSKKQPITVXXXXXXXXXXKQQNADKSRKNIG--- 188
           MDAK+LAKSKRAH+QH +K+ H N  SK                 +Q  +K  +++G   
Sbjct: 1   MDAKALAKSKRAHSQHHSKRPHSNKTSKAPSAGNVGAGNAKKQPGKQIREKPHQSMGLSR 60

Query: 189 --TNWDRYEEEFDD-SENSFID--EKYSDVVLPKSKGADFGHLISEANSK 323
             +NWDRYEEEFD  SE   I+   + +DV++PKSKGAD+G LISEA S+
Sbjct: 61  LPSNWDRYEEEFDSGSEGPSINSTNQANDVIVPKSKGADYGELISEAISQ 110


>ref|NP_199228.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332007684|gb|AED95067.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 355

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
 Frame = +3

Query: 18  MDAKSLAKSKRAHTQHKNKKFHPNPKSKKQPITVXXXXXXXXXXKQQNADKSRKN-IGTN 194
           MD+KSLAKSKRAHT H +KK H   K K   ++            +      R + + +N
Sbjct: 1   MDSKSLAKSKRAHTLHHSKKSHSVHKPKVPGVSEKNPEKLQGNQTKSPVQSRRVSALPSN 60

Query: 195 WDRYEEEFDDSENSFIDEKYSDVVLPKSKGADFGHLISEA----NSKLEYQIN 341
           WDRY++E D +E+S I   +SDV++PKSKGAD+ HLISEA    NSK+E  ++
Sbjct: 61  WDRYDDELDAAEDSSI-SLHSDVIVPKSKGADYLHLISEAQAESNSKIENNLD 112


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