BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019760
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-45
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM...   170   1e-44
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put...   165   2e-42
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago...   160   4e-41
gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays] g...   156   3e-40

>ref|XP_002321063.1| predicted protein [Populus trichocarpa] gi|222861836|gb|EEE99378.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  169 bits (427), Expect(2) = 5e-45
 Identities = 78/122 (63%), Positives = 100/122 (81%)
 Frame = -2

Query: 367 YCHPKYRFPSQQDVLNFVVKIARQTLKKQPKTLIVVGAYSIGKECVYVAILDALGVKLHT 188
           YC+PKY+FPS++DVL++VV++ + +LKKQPKTL+VVGAYSIGKE VY+AI  ALGVK++ 
Sbjct: 185 YCNPKYKFPSKEDVLSYVVRVTKSSLKKQPKTLVVVGAYSIGKESVYLAISKALGVKIYA 244

Query: 187 NTSRRWVLQSFGWPELSEKLCSHCKDTTLHILPLSSLRHETLKKYLDSFAYECTTVLAFR 8
           N SRR +LQSFGWP+LS  LC+   DT LH+LP+SSLR+ETLK YL +   +   VLAFR
Sbjct: 245 NNSRRRILQSFGWPDLSTNLCTKAIDTCLHVLPISSLRYETLKDYLKNHVNQYAAVLAFR 304

Query: 7   PT 2
           PT
Sbjct: 305 PT 306



 Score = 37.4 bits (85), Expect(2) = 5e-45
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = -3

Query: 435 KLMQSHLLLTSHRVNLLYLDTTF 367
           KLMQ+H LL ++RVN+LYLDTT+
Sbjct: 163 KLMQAHPLLANNRVNVLYLDTTY 185


>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
          Length = 505

 Score =  170 bits (430), Expect(2) = 1e-44
 Identities = 78/122 (63%), Positives = 102/122 (83%)
 Frame = -2

Query: 367 YCHPKYRFPSQQDVLNFVVKIARQTLKKQPKTLIVVGAYSIGKECVYVAILDALGVKLHT 188
           YC+PKYRFPS+++VLN+VVKI +  LK  P+TL+VVGAYSIGKECVY+AI  ALGVK++ 
Sbjct: 308 YCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISKALGVKIYA 367

Query: 187 NTSRRWVLQSFGWPELSEKLCSHCKDTTLHILPLSSLRHETLKKYLDSFAYECTTVLAFR 8
           N SRR +LQ+FGWP+LS+KLC++  +T LH+LP+SSLR ETLK YL ++  + T +LAFR
Sbjct: 368 NASRRRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSLRVETLKDYLKTYKEQFTAILAFR 427

Query: 7   PT 2
           PT
Sbjct: 428 PT 429



 Score = 34.7 bits (78), Expect(2) = 1e-44
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -3

Query: 435 KLMQSHLLLTSHRVNLLYLDTTF 367
           KLMQ++ LL + RVN+LYLDTT+
Sbjct: 286 KLMQAYHLLVNQRVNVLYLDTTY 308


>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223547811|gb|EEF49303.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 493

 Score =  165 bits (417), Expect(2) = 2e-42
 Identities = 76/122 (62%), Positives = 99/122 (81%)
 Frame = -2

Query: 367 YCHPKYRFPSQQDVLNFVVKIARQTLKKQPKTLIVVGAYSIGKECVYVAILDALGVKLHT 188
           YC+PKY+FPS++DVLN+VV++ +  LK+QP+TLIVVGAYSIGKECVY++I  ALGVK++ 
Sbjct: 296 YCNPKYKFPSKEDVLNYVVRVTKDFLKQQPETLIVVGAYSIGKECVYLSISKALGVKIYA 355

Query: 187 NTSRRWVLQSFGWPELSEKLCSHCKDTTLHILPLSSLRHETLKKYLDSFAYECTTVLAFR 8
           + SRR +L+SFGW +LS  LC+  KDT LH+LP+SSLR ETLK YL  +  +   VLAFR
Sbjct: 356 SASRRQILESFGWSDLSRSLCTQPKDTPLHVLPISSLRVETLKDYLKKYINQYRAVLAFR 415

Query: 7   PT 2
           PT
Sbjct: 416 PT 417



 Score = 32.7 bits (73), Expect(2) = 2e-42
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = -3

Query: 435 KLMQSHLLLTSHRVNLLYLDTTF 367
           K+MQS+ LL + +VN LYLDTT+
Sbjct: 274 KVMQSYHLLVNQKVNALYLDTTY 296


>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
           gi|87241310|gb|ABD33168.1| DNA repair
           metallo-beta-lactamase [Medicago truncatula]
           gi|355499554|gb|AES80757.1| DNA cross-link repair
           protein SNM1 [Medicago truncatula]
          Length = 511

 Score =  160 bits (406), Expect(2) = 4e-41
 Identities = 75/122 (61%), Positives = 99/122 (81%)
 Frame = -2

Query: 367 YCHPKYRFPSQQDVLNFVVKIARQTLKKQPKTLIVVGAYSIGKECVYVAILDALGVKLHT 188
           YC+PKY+FPS+ DVLN+VVKI    LKK P+TL+VVGAYSIGKECVY+AI  ALGVK+H 
Sbjct: 314 YCNPKYKFPSKDDVLNYVVKITNNHLKKYPRTLVVVGAYSIGKECVYLAISKALGVKIHV 373

Query: 187 NTSRRWVLQSFGWPELSEKLCSHCKDTTLHILPLSSLRHETLKKYLDSFAYECTTVLAFR 8
           N SRR +L ++  P+ S++LC++  +T LH+LP+SSLR ETLK+YL ++  + T+VLAFR
Sbjct: 374 NASRRRILLAYDCPDYSDRLCTNGNNTLLHVLPMSSLRIETLKEYLKTYKEQFTSVLAFR 433

Query: 7   PT 2
           PT
Sbjct: 434 PT 435



 Score = 32.3 bits (72), Expect(2) = 4e-41
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 435 KLMQSHLLLTSHRVNLLYLDTTF 367
           KLMQ + L  + RVN+LYLDTT+
Sbjct: 292 KLMQDYHLFVNKRVNVLYLDTTY 314


>gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
           gi|413918215|gb|AFW58147.1| hypothetical protein
           ZEAMMB73_659537 [Zea mays]
          Length = 505

 Score =  156 bits (394), Expect(2) = 3e-40
 Identities = 74/122 (60%), Positives = 96/122 (78%)
 Frame = -2

Query: 367 YCHPKYRFPSQQDVLNFVVKIARQTLKKQPKTLIVVGAYSIGKECVYVAILDALGVKLHT 188
           YC+PKY+FP Q+DV++FVV+  R+ LKKQPKTLIVVGAYSIGKE VY+AI  AL   ++T
Sbjct: 307 YCNPKYKFPPQEDVIDFVVRTTRRYLKKQPKTLIVVGAYSIGKENVYLAISQALEAHIYT 366

Query: 187 NTSRRWVLQSFGWPELSEKLCSHCKDTTLHILPLSSLRHETLKKYLDSFAYECTTVLAFR 8
           + SRR +L SFGWP+LS++LCS  + ++LH+LPL S+ HE LKKYL++       VLAFR
Sbjct: 367 DASRRRILYSFGWPDLSKRLCSCNQSSSLHVLPLGSINHENLKKYLETLNGRFLAVLAFR 426

Query: 7   PT 2
           PT
Sbjct: 427 PT 428



 Score = 34.3 bits (77), Expect(2) = 3e-40
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -3

Query: 435 KLMQSHLLLTSHRVNLLYLDTTF 367
           K MQSH LL   RVNL+YLDTT+
Sbjct: 285 KTMQSHPLLQRGRVNLVYLDTTY 307