BLASTX nr result

ID: Coptis23_contig00019753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019753
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517489.1| conserved hypothetical protein [Ricinus comm...   383   e-104
ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protei...   372   e-101
emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]   369   e-100
ref|XP_004163531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   361   1e-97

>ref|XP_002517489.1| conserved hypothetical protein [Ricinus communis]
            gi|223543500|gb|EEF45031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2190

 Score =  383 bits (984), Expect = e-104
 Identities = 188/288 (65%), Positives = 220/288 (76%)
 Frame = +1

Query: 1    IGKFSVLSRLCLLRGILTTVPRTVLNNHFELSGDGSNCLGVDGSCSNTVWTILYDGILPE 180
            +G FSVLSRLCL+RGILT V RTVLN  F  S    N    +G+C+++V TILYDGILPE
Sbjct: 288  VGSFSVLSRLCLIRGILTAVSRTVLNLQFVESSSKLNGHEGNGTCASSVKTILYDGILPE 347

Query: 181  LCNYCENPVDSHFNFHVLTVMQICFQQIKTLVXXXXXXXXXXXXXXXDEMGSRILRIIWN 360
            LCNYCENP+DSHFNFH LTVMQIC QQ+KT +               +EMGSRILRIIWN
Sbjct: 348  LCNYCENPIDSHFNFHTLTVMQICLQQMKTSLLANLIDLSDNYDPMPEEMGSRILRIIWN 407

Query: 361  NLEDPLNQTVKQVHLIFDLFVDIQFTLNSAEYSERMEFFLKKTTSDLLCLGPRCKGRYVP 540
            NLEDPL+QTVKQVH +FDLF+DIQ TL     S++++ FL+K  SDLL LG RCKGRY+P
Sbjct: 408  NLEDPLSQTVKQVHQVFDLFLDIQSTLRLGVGSQKIKSFLEKIASDLLPLGSRCKGRYIP 467

Query: 541  LASLTKRLGAKTVLKMSPDLLFQTIYAFIDDDVCCAATTFLKCFLECLRDDCWSSDGVER 720
            LA LTKRLG K++L+M PDLLF+T+ A+IDDDVCCAATTFLKCFLECLRD+CW+++GVE 
Sbjct: 468  LALLTKRLGPKSMLEMCPDLLFETVQAYIDDDVCCAATTFLKCFLECLRDECWNNNGVEE 527

Query: 721  GYMNFRGLCLPPIMYGLVSGVPKLRSNLNTYAXXXXXXXXXXXXFPML 864
            GY  +RGLCLPP +YGL SGV KLRSNLNTYA            FPML
Sbjct: 528  GYAVYRGLCLPPFLYGLTSGVSKLRSNLNTYALPILLEVDVDSIFPML 575


>ref|XP_002305983.1| predicted protein [Populus trichocarpa] gi|222848947|gb|EEE86494.1|
            predicted protein [Populus trichocarpa]
          Length = 2134

 Score =  375 bits (962), Expect = e-102
 Identities = 185/288 (64%), Positives = 217/288 (75%)
 Frame = +1

Query: 1    IGKFSVLSRLCLLRGILTTVPRTVLNNHFELSGDGSNCLGVDGSCSNTVWTILYDGILPE 180
            I  FS LSRLCL+RGILT V R VLN+ F +S  G N    +G+C  +V TILYDGILPE
Sbjct: 270  INGFSGLSRLCLIRGILTAVSRAVLNSQFVVSSGGLNVNEENGNCCGSVKTILYDGILPE 329

Query: 181  LCNYCENPVDSHFNFHVLTVMQICFQQIKTLVXXXXXXXXXXXXXXXDEMGSRILRIIWN 360
            LCNYCENP+DSHFNFH LTV+QIC QQ+KT +                EMG+RIL+IIWN
Sbjct: 330  LCNYCENPIDSHFNFHALTVLQICLQQMKTSMLSNLTDISNNYEPIPVEMGTRILKIIWN 389

Query: 361  NLEDPLNQTVKQVHLIFDLFVDIQFTLNSAEYSERMEFFLKKTTSDLLCLGPRCKGRYVP 540
            +LEDPL+QTVKQVHLIFDLF+DIQ +L+  E SER++ FL+K  SDLL LG  CKGRYVP
Sbjct: 390  SLEDPLSQTVKQVHLIFDLFLDIQSSLHWGEGSERIKSFLQKIASDLLRLGTGCKGRYVP 449

Query: 541  LASLTKRLGAKTVLKMSPDLLFQTIYAFIDDDVCCAATTFLKCFLECLRDDCWSSDGVER 720
            LA LTKRLGAKT+L MSPDLLF+ + A+IDDDVCCAATTFLKCFLECLRD+CW+ +G+E 
Sbjct: 450  LALLTKRLGAKTILDMSPDLLFEIVQAYIDDDVCCAATTFLKCFLECLRDECWNCNGIEE 509

Query: 721  GYMNFRGLCLPPIMYGLVSGVPKLRSNLNTYAXXXXXXXXXXXXFPML 864
            GY  +RG CLPP ++GL SGV KLRSN+NTYA            FPML
Sbjct: 510  GYAIYRGHCLPPFLFGLASGVSKLRSNVNTYALPVLLEVDVDSIFPML 557


>ref|XP_002277958.2| PREDICTED: thyroid adenoma-associated protein homolog [Vitis
            vinifera]
          Length = 2223

 Score =  372 bits (955), Expect = e-101
 Identities = 186/288 (64%), Positives = 220/288 (76%)
 Frame = +1

Query: 1    IGKFSVLSRLCLLRGILTTVPRTVLNNHFELSGDGSNCLGVDGSCSNTVWTILYDGILPE 180
            I  F+VLSRLCL+RGILT V RTVL + F +S +  N     G  +++V TILYDGILPE
Sbjct: 307  ICNFAVLSRLCLIRGILTAVSRTVLTSQFIVSRNDLNGFDPQGISNSSVQTILYDGILPE 366

Query: 181  LCNYCENPVDSHFNFHVLTVMQICFQQIKTLVXXXXXXXXXXXXXXXDEMGSRILRIIWN 360
            LCNYCENP DSHFNFH LTVMQIC QQIKT +               ++MG+RILRIIWN
Sbjct: 367  LCNYCENPTDSHFNFHALTVMQICLQQIKTSMSANLASVSENYDLIPEDMGTRILRIIWN 426

Query: 361  NLEDPLNQTVKQVHLIFDLFVDIQFTLNSAEYSERMEFFLKKTTSDLLCLGPRCKGRYVP 540
            NLEDPL+QTVKQVHLIFDLF+DIQ +L+ AE +ER++ FL +  +DLL +GPRCKGRYVP
Sbjct: 427  NLEDPLSQTVKQVHLIFDLFLDIQSSLHWAEDNERIKPFLCRIATDLLRMGPRCKGRYVP 486

Query: 541  LASLTKRLGAKTVLKMSPDLLFQTIYAFIDDDVCCAATTFLKCFLECLRDDCWSSDGVER 720
            LASLTKRLGAKT+L MSPDLLF+T++A+IDDDVCCAAT+FLKCF E LRD+CWSSDG+E 
Sbjct: 487  LASLTKRLGAKTLLGMSPDLLFETVHAYIDDDVCCAATSFLKCFFEHLRDECWSSDGIEG 546

Query: 721  GYMNFRGLCLPPIMYGLVSGVPKLRSNLNTYAXXXXXXXXXXXXFPML 864
            GY  +RG CL P++ GL SGV KLR+NLNTYA            FPML
Sbjct: 547  GYAIYRGHCLSPLLCGLASGVSKLRTNLNTYALPVLLEIDVDSIFPML 594


>emb|CAN72934.1| hypothetical protein VITISV_020616 [Vitis vinifera]
          Length = 2161

 Score =  369 bits (946), Expect = e-100
 Identities = 182/272 (66%), Positives = 216/272 (79%)
 Frame = +1

Query: 1    IGKFSVLSRLCLLRGILTTVPRTVLNNHFELSGDGSNCLGVDGSCSNTVWTILYDGILPE 180
            I  F+VLSRLCL+RGILT V RTVL + F +S +  N     G  +++V TILYDGILPE
Sbjct: 257  ICNFAVLSRLCLIRGILTAVSRTVLTSQFVVSRNDLNGFDPQGFSNSSVQTILYDGILPE 316

Query: 181  LCNYCENPVDSHFNFHVLTVMQICFQQIKTLVXXXXXXXXXXXXXXXDEMGSRILRIIWN 360
            LCNYCENP DSHFNFH LTVMQIC QQIKT +               ++MG+RILRIIWN
Sbjct: 317  LCNYCENPTDSHFNFHALTVMQICLQQIKTSMSANLASVSENYDLIPEDMGTRILRIIWN 376

Query: 361  NLEDPLNQTVKQVHLIFDLFVDIQFTLNSAEYSERMEFFLKKTTSDLLCLGPRCKGRYVP 540
            NLEDPL+QTVKQVHLIFDLF+DIQ +L+ AE +ER++ FL +  +DLL +GPRCKGRYVP
Sbjct: 377  NLEDPLSQTVKQVHLIFDLFLDIQSSLHWAEDNERIKPFLCRIATDLLRMGPRCKGRYVP 436

Query: 541  LASLTKRLGAKTVLKMSPDLLFQTIYAFIDDDVCCAATTFLKCFLECLRDDCWSSDGVER 720
            LASLTKRLGAKT+L MSPDLLF+T++A+IDDDVCCAAT+FLKCF E LRD+CWSSDG+E 
Sbjct: 437  LASLTKRLGAKTLLGMSPDLLFETVHAYIDDDVCCAATSFLKCFFEHLRDECWSSDGIEG 496

Query: 721  GYMNFRGLCLPPIMYGLVSGVPKLRSNLNTYA 816
            GY  +RG CL P++ GL SGV KLR+NLNTYA
Sbjct: 497  GYAIYRGHCLSPLLCGLASGVSKLRTNLNTYA 528


>ref|XP_004163531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101204483 [Cucumis
            sativus]
          Length = 2186

 Score =  361 bits (926), Expect = 1e-97
 Identities = 185/289 (64%), Positives = 216/289 (74%), Gaps = 1/289 (0%)
 Frame = +1

Query: 1    IGKFSVLSRLCLLRGILTTVPRTVLNNHFEL-SGDGSNCLGVDGSCSNTVWTILYDGILP 177
            I  FSVLSRLCL+RGILT +PR VLN  F +  GD +   G   S  N+V TILYDGILP
Sbjct: 301  IRTFSVLSRLCLIRGILTAIPRPVLNIPFSMVEGDSNGHPGCLNS-GNSVKTILYDGILP 359

Query: 178  ELCNYCENPVDSHFNFHVLTVMQICFQQIKTLVXXXXXXXXXXXXXXXDEMGSRILRIIW 357
            ELCNYCENP DSHFNFH LTV+QIC QQIKT +               +EMGSRIL I+W
Sbjct: 360  ELCNYCENPTDSHFNFHSLTVLQICLQQIKTSLVSNLTDTSCSYDPLPEEMGSRILSIMW 419

Query: 358  NNLEDPLNQTVKQVHLIFDLFVDIQFTLNSAEYSERMEFFLKKTTSDLLCLGPRCKGRYV 537
             NL+DPL+QTVKQVHLIFDLF++IQ +L  +E SE+++ FL+K   DLL LG RCKGRYV
Sbjct: 420  TNLDDPLSQTVKQVHLIFDLFLEIQSSLCWSEGSEKIKLFLRKIAFDLLRLGSRCKGRYV 479

Query: 538  PLASLTKRLGAKTVLKMSPDLLFQTIYAFIDDDVCCAATTFLKCFLECLRDDCWSSDGVE 717
            PLASLTKRLGAKT+L MSP LL +T+ A+IDDDVCCAAT+FLKCFLE LRD+CWSSDG+E
Sbjct: 480  PLASLTKRLGAKTLLDMSPSLLSETVQAYIDDDVCCAATSFLKCFLEHLRDECWSSDGIE 539

Query: 718  RGYMNFRGLCLPPIMYGLVSGVPKLRSNLNTYAXXXXXXXXXXXXFPML 864
             GY  +RG CLPP+++GL SG+ KLRSNLNTYA            FPML
Sbjct: 540  GGYAIYRGHCLPPVLHGLGSGISKLRSNLNTYALPVLFEVDLDSIFPML 588


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