BLASTX nr result

ID: Coptis23_contig00019748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00019748
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216...   277   3e-72
ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253...   265   1e-68
emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]   265   1e-68
emb|CBI16094.3| unnamed protein product [Vitis vinifera]              252   1e-64
ref|XP_002520534.1| DNA binding protein, putative [Ricinus commu...   235   1e-59

>ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
           gi|449470904|ref|XP_004153145.1| PREDICTED:
           uncharacterized protein LOC101205712 [Cucumis sativus]
           gi|449525506|ref|XP_004169758.1| PREDICTED:
           uncharacterized LOC101205712 [Cucumis sativus]
          Length = 336

 Score =  277 bits (709), Expect = 3e-72
 Identities = 166/308 (53%), Positives = 196/308 (63%), Gaps = 34/308 (11%)
 Frame = -2

Query: 899 DPSCKTSASEERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQ 720
           D SC   A EERV EWETGLP A DLTPLSQ LI PELASAFSI+  P +T++DVNRASQ
Sbjct: 20  DESC---AHEERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQ 76

Query: 719 NTISSLRR-QNSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVEN 543
           NT+S+LR  Q   F   NFKS   F +DR    + M              + RK++ V+ 
Sbjct: 77  NTLSNLRGFQAQAFSSNNFKS---FNDDRTQDHDAMVVEGDEATERDAGSDSRKLRKVDC 133

Query: 542 VEEGDSALRMENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNV 363
            EE DSALR +N  +D SARTLKR RLVWTPQLHKRFVDVV HLGI NAVPKTIMQ+MNV
Sbjct: 134 AEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 193

Query: 362 EGLTRENVASHLQKYRLFVKR------QGPASSDQLFASTPTVPQ--------------N 243
           EGLTRENVASHLQKYRL++KR      +GP+S D++FASTP  P               +
Sbjct: 194 EGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPPTLHESTNSGQANGNGH 253

Query: 242 VPL-APMPYVAPMQPMQMHMGMSGGGN---------LAPGS---YSGFEFHPYGMSREHQ 102
           +P+  PMPY  PM PM + +GM+  G+           PGS   Y GFE HP+ M   HQ
Sbjct: 254 LPVPTPMPYGPPMMPMPV-LGMAASGHAHSYMGMPVAHPGSAQGYPGFETHPFNMM--HQ 310

Query: 101 GHWPGNKF 78
             W GNK+
Sbjct: 311 RDWSGNKY 318


>ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
          Length = 311

 Score =  265 bits (678), Expect = 1e-68
 Identities = 159/285 (55%), Positives = 189/285 (66%), Gaps = 30/285 (10%)
 Frame = -2

Query: 872 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 693
           +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 18  DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 77

Query: 692 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEGDSALRM 513
           +  F   NFKS   F E+R   +  +              E RK++ V+  EE DSA+R 
Sbjct: 78  SHSFSSNNFKS---FNEER-NREPAVVEPEETGDRDGSGSESRKVRKVDCAEEADSAMRT 133

Query: 512 ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 333
           EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 134 ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 193

Query: 332 HLQKYRLFVKR------QGPASSDQLFASTPTVPQ-------------------NVPLAP 228
           HLQKYRL++KR      +GP+SSD LFASTP VPQ                   +VP+ P
Sbjct: 194 HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPI-P 251

Query: 227 MPYVAPMQPMQMHMGMSGG----GNLAPGSYSGFE-FHPYGMSRE 108
           MPY   M  M + +G+S G    G   PG Y G+E  HPY M ++
Sbjct: 252 MPYGQTMMHMPV-LGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 295


>emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
          Length = 362

 Score =  265 bits (678), Expect = 1e-68
 Identities = 159/285 (55%), Positives = 189/285 (66%), Gaps = 30/285 (10%)
 Frame = -2

Query: 872 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 693
           +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 69  DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 128

Query: 692 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEGDSALRM 513
           +  F   NFKS   F E+R   +  +              E RK++ V+  EE DSA+R 
Sbjct: 129 SHSFSSNNFKS---FNEER-NREPAVVEPEETGDRDGSGSESRKVRKVDCAEEADSAMRT 184

Query: 512 ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 333
           EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 185 ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 244

Query: 332 HLQKYRLFVKR------QGPASSDQLFASTPTVPQ-------------------NVPLAP 228
           HLQKYRL++KR      +GP+SSD LFASTP VPQ                   +VP+ P
Sbjct: 245 HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPI-P 302

Query: 227 MPYVAPMQPMQMHMGMSGG----GNLAPGSYSGFE-FHPYGMSRE 108
           MPY   M  M + +G+S G    G   PG Y G+E  HPY M ++
Sbjct: 303 MPYGQTMMHMPV-LGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 346


>emb|CBI16094.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  252 bits (643), Expect = 1e-64
 Identities = 156/285 (54%), Positives = 182/285 (63%), Gaps = 30/285 (10%)
 Frame = -2

Query: 872 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 693
           +ERV EWE GLP+A DLTPLSQ LI PELASAFSIT EP +T+L+VNRASQ+T S++R Q
Sbjct: 129 DERVLEWEAGLPAADDLTPLSQPLIPPELASAFSITPEPCRTLLEVNRASQSTFSTIRGQ 188

Query: 692 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEGDSALRM 513
           +  F   NFKS   F E+R  + EP                           E DSA+R 
Sbjct: 189 SHSFSSNNFKS---FNEER--NREPA--------------------------EADSAMRT 217

Query: 512 ENLNEDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENVAS 333
           EN N+D SARTLKR RLVWTPQLHKRFVDVVGHLGI NAVPKTIMQ+MNVEGLTRENVAS
Sbjct: 218 ENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVAS 277

Query: 332 HLQKYRLFVKR------QGPASSDQLFASTPTVPQ-------------------NVPLAP 228
           HLQKYRL++KR      +GP+SSD LFASTP VPQ                   +VP+ P
Sbjct: 278 HLQKYRLYLKRMQGLSNEGPSSSDHLFASTP-VPQSLHESGGSVHGNGHGNGHMSVPI-P 335

Query: 227 MPYVAPMQPMQMHMGMSGG----GNLAPGSYSGFE-FHPYGMSRE 108
           MPY   M  M + +G+S G    G   PG Y G+E  HPY M ++
Sbjct: 336 MPYGQTMMHMPV-LGVSHGHGQMGMSGPGGYHGYESHHPYNMLQQ 379


>ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
           gi|223540376|gb|EEF41947.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 316

 Score =  235 bits (600), Expect = 1e-59
 Identities = 144/298 (48%), Positives = 181/298 (60%), Gaps = 33/298 (11%)
 Frame = -2

Query: 872 EERVQEWETGLPSATDLTPLSQYLISPELASAFSITAEPFQTMLDVNRASQNTISSLRRQ 693
           EERV++WE GLP+A DLTPLSQ LI PELASAFSI+ EP ++++DVNR SQNT+ SLR  
Sbjct: 23  EERVRDWEFGLPTADDLTPLSQPLIPPELASAFSISPEPHRSIIDVNRESQNTLLSLRSA 82

Query: 692 NSGFGDKNFKSLCSFMEDRCGSDEPMXXXXXXXXXXXXXXEKRKIQSVENVEEGDSALRM 513
              F    FKS   +  +   + E                ++ K++ +++ EE DSALR 
Sbjct: 83  TGAFSSNKFKS---YNNNDDPTAETAVEEINNNTNNNNDTDQEKLRRIDSGEEADSALRT 139

Query: 512 ENLN--EDCSARTLKRARLVWTPQLHKRFVDVVGHLGIDNAVPKTIMQMMNVEGLTRENV 339
           ENL   +  +ARTLKR RLVWTPQLHKRFVDVV +LGI NAVPKTIMQ+MNVEGLTRENV
Sbjct: 140 ENLTGEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENV 199

Query: 338 ASHLQKYRLFVKR------QGPASSD-QLFASTPTVPQ---------------------- 246
           ASHLQKYRL++KR      +GP++SD QLFASTP VPQ                      
Sbjct: 200 ASHLQKYRLYLKRMQGLSSEGPSASDNQLFASTP-VPQSLQDNGNSNGNAGEGNGHLGMA 258

Query: 245 -NVPLAPMPYVAPMQPMQMH-MGMSGGGNLAPGSYSGFEFHPYGMSREHQGHWPGNKF 78
            +VP+   P V PM  M M+ M +    N    +++    HPY M +     W GN +
Sbjct: 259 VSVPVPYHPGVGPMMTMPMYGMQLGNNNNNHNHNHNHHHHHPYNMIQHRD--WSGNNY 314


Top